RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 PTH2Q96A98 100 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 TMEM141Q96I45 108 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 SCGB3A1Q96QR1 104 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 SPTBN2O15020 2390 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 EP300Q09472 2414 aaPredicted RBP3.25□□□□□ -1.89
CTSC-208ENST00000533897 ASIPP42127 132 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 FOXI1Q12951 378 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 TCTEX1D4Q5JR98 221 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 C16orf92Q96LL3 132 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 SIGMAR1Q99720 223 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 PRORYQ9H606 182 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 TSSC4Q9Y5U2 329 aaPredicted RBP3.25□□□□□ -1.89
CTSC-208ENST00000533897 LINC01549A6NIU2 74 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 AVPP01185 164 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 RPL39P62891 51 aaKnown RBP3.25□□□□□ -1.89
CTSC-208ENST00000533897 KLHL30-AS1Q8NEE0 82 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 C10orf105Q8TEF2 133 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 IGHV4-61A0A0C4DH41 118 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 PPP1R17O96001 155 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 PMVKQ15126 192 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 MDFICQ9P1T7 246 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 RAXQ9Y2V3 346 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 CFAP46Q8IYW2 2715 aa3.25□□□□□ -1.89
CTSC-208ENST00000533897 M0R2P5 195 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 ELANEP08246 267 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 FOXC1Q12948 553 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 AP1S3Q96PC3 154 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 UFC1Q9Y3C8 167 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 TMEM89A2RUT3 159 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 K7EQG2 157 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 TCL1BO95988 128 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 BLCAPP62952 87 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 ETDBQ3ZM63 59 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 GAGE13Q4V321 117 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 FAM19A3Q7Z5A8 133 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 C10orf126Q8N4M7 172 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 VCX2Q9H322 139 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 TP53TG1Q9Y2A0 90 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 CNOT1A5YKK6 2376 aaKnown RBP3.24□□□□□ -1.89
CTSC-208ENST00000533897 TTC28Q96AY4 2481 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 A6NJY4 79 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 OR11H12B2RN74 326 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 HOXA3O43365 443 aaPredicted RBP3.24□□□□□ -1.89
CTSC-208ENST00000533897 UCNP55089 124 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 OR11H1Q8NG94 326 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 OR11H2Q8NH07 326 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 IL17DQ8TAD2 202 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 HIST1H4GQ99525 98 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 RHPN1-AS1Q9BWJ2 59 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 DAZ1Q9NQZ3 744 aaKnown RBP3.24□□□□□ -1.89
CTSC-208ENST00000533897 LINC00527Q9UJ94 153 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 CYSLTR1Q9Y271 337 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 PYGO1Q9Y3Y4 419 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 ACACAQ13085 2346 aa3.24□□□□□ -1.89
CTSC-208ENST00000533897 A0A0B4J2C4 111 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 ZNF22P17026 224 aaPredicted RBP3.23□□□□□ -1.89
CTSC-208ENST00000533897 MRPS36P82909 103 aaKnown RBP3.23□□□□□ -1.89
CTSC-208ENST00000533897 RHOHQ15669 191 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 OR10J6PQ8NGY7 276 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 RNF183Q96D59 192 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 PGPEP1Q9NXJ5 209 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 PIK3CD-AS1Q5SR53 167 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 SAMD13Q5VXD3 122 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 CEP295Q9C0D2 2601 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 ZFHX2Q9C0A1 2572 aaPredicted RBP3.23□□□□□ -1.89
CTSC-208ENST00000533897 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 ZNF815PA8K554 130 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 LEPROTO15243 131 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 IGHV3-33P01772 117 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 CRYBA4P53673 196 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 BRD3OSQ6XYD6 125 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 C20orf203Q8NBC4 194 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 UBR5O95071 2799 aaPredicted RBP3.23□□□□□ -1.89
CTSC-208ENST00000533897 RBMY1BA6NDE4 496 aaKnown RBP3.23□□□□□ -1.89
CTSC-208ENST00000533897 RBMY1EA6NEQ0 496 aaKnown RBP3.23□□□□□ -1.89
CTSC-208ENST00000533897 SDHAF1A6NFY7 115 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 VCYO14598 125 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 RBMY1DP0C7P1 496 aaKnown RBP3.23□□□□□ -1.89
CTSC-208ENST00000533897 XGP55808 180 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 DEFB121Q5J5C9 76 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 PAPPA-AS1Q5QFB9 102 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 Q8N1Y9 231 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 PHLDA3Q9Y5J5 127 aa3.23□□□□□ -1.89
CTSC-208ENST00000533897 HIVEP3Q5T1R4 2406 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 RHODO00212 210 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 CHCHD7Q9BUK0 85 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 C10orf99Q6UWK7 81 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 TEN1Q86WV5 123 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 Q8N2B8 174 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 MTURNQ8N3F0 131 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 C11orf72Q8NBR9 251 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 OPRPNQ99935 248 aaPredicted RBP3.22□□□□□ -1.89
CTSC-208ENST00000533897 GTSF1LQ9H1H1 148 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 Q9UF83 564 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 CACNA1BQ00975 2339 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 RPL13AP40429 203 aaKnown RBP3.22□□□□□ -1.89
CTSC-208ENST00000533897 SCGB2A2Q13296 93 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 SDIM1Q6ZPB5 146 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms