RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 C19orf71A6NCJ1 209 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 MGST1P10620 155 aaKnown RBP8.44□□□□□ -1.06
CAPN1-223ENST00000533079 RAB5BP61020 215 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 RPL19P84098 196 aaKnown RBP8.44□□□□□ -1.06
CAPN1-223ENST00000533079 GFI1BQ5VTD9 330 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 Q86TA4 180 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 NUDT11Q96G61 164 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 IGLV5-52A0A0A0MRZ9 124 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 NPIPB6E9PJ23 425 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 M0R3E3 92 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 GATCO43716 136 aaKnown RBP8.43□□□□□ -1.06
CAPN1-223ENST00000533079 RPS10P46783 165 aaKnown RBP8.43□□□□□ -1.06
CAPN1-223ENST00000533079 COX19Q49B96 90 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 Q6ZTI0 123 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 ODF3Q96PU9 254 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
CAPN1-223ENST00000533079 SLAQ13239 276 aa8.42□□□□□ -1.06
CAPN1-223ENST00000533079 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
CAPN1-223ENST00000533079 PRNTQ86SH4 94 aa8.42□□□□□ -1.06
CAPN1-223ENST00000533079 GFRA4Q9GZZ7 299 aa8.42□□□□□ -1.06
CAPN1-223ENST00000533079 RNASE7Q9H1E1 156 aaKnown RBP8.42□□□□□ -1.06
CAPN1-223ENST00000533079 LENEPQ9Y5L5 61 aa8.42□□□□□ -1.06
CAPN1-223ENST00000533079 TNFRSF18Q9Y5U5 241 aa8.42□□□□□ -1.06
CAPN1-223ENST00000533079 TRAV8-1A0A0A6YYK1 113 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 A8MWL6 223 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 PHOX2AO14813 284 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 PAX4O43316 350 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
CAPN1-223ENST00000533079 EVI2AP22794 236 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 LEPP41159 167 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 FOXA3P55318 350 aaPredicted RBP8.41□□□□□ -1.06
CAPN1-223ENST00000533079 HAMPP81172 84 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 RASL11AQ6T310 242 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 DAZAP1Q96EP5 407 aaKnown RBP8.41□□□□□ -1.06
CAPN1-223ENST00000533079 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
CAPN1-223ENST00000533079 TRBV7-9A0A0J9YWB2 115 aa8.4□□□□□ -1.06
CAPN1-223ENST00000533079 LOC105371267A0A1B0GV96 52 aa8.4□□□□□ -1.06
CAPN1-223ENST00000533079 P01737 135 aa8.4□□□□□ -1.06
CAPN1-223ENST00000533079 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
CAPN1-223ENST00000533079 LINC00477Q96M19 166 aa8.4□□□□□ -1.06
CAPN1-223ENST00000533079 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
CAPN1-223ENST00000533079 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
CAPN1-223ENST00000533079 CT45A10P0DMU9 189 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 MRPL23Q16540 153 aaKnown RBP8.39□□□□□ -1.07
CAPN1-223ENST00000533079 LYPD5Q6UWN5 251 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 NEGR1Q7Z3B1 354 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 NHLRC2Q8NBF2 726 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 SGK494Q96LW2 274 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 VGLL1Q99990 258 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 NDFIP1Q9BT67 221 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
CAPN1-223ENST00000533079 IGKV2-40A0A087WW87 121 aaPredicted RBP8.38□□□□□ -1.07
CAPN1-223ENST00000533079 TRGV1A0A0A0MS02 117 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 PRAC2D3DTV9 90 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 IGKV2D-40P01614 121 aaPredicted RBP8.38□□□□□ -1.07
CAPN1-223ENST00000533079 TRGC2P03986 189 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 CRIP1P50238 77 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 ZNF138P52744 262 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 ANXA2RQ3ZCQ2 193 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 WDR73Q6P4I2 378 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 ATP5L2Q7Z4Y8 100 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 C11orf72Q8NBR9 251 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 ZC2HC1AQ96GY0 325 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 GNB1LQ9BYB4 327 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 AGPAT4-IT1Q9H0P7 198 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 PLA2G2DQ9UNK4 145 aa8.38□□□□□ -1.07
CAPN1-223ENST00000533079 PSCAO43653 123 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 SPINK4O60575 86 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 MT-ND6P03923 174 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 TCL1AP56279 114 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 RPS20P60866 119 aaKnown RBP8.37□□□□□ -1.07
CAPN1-223ENST00000533079 SMUG1Q53HV7 270 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 FAM162BQ5T6X4 162 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 GSN-AS1Q9NRJ2 163 aa8.37□□□□□ -1.07
CAPN1-223ENST00000533079 XKRY2A2RUG3 117 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 C5orf52A6NGY3 159 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 FABP5P3A8MUU1 101 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 CRYBA4P53673 196 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 Q6AWC8 147 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 WFDC10BQ8IUB3 73 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 Q8N814 137 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 NUP35Q8NFH5 326 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
CAPN1-223ENST00000533079 C7orf71A4D174 169 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 LRCOL1A6NCL2 159 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 J3KRW8 73 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 OXTP01178 125 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 CRYGDP07320 174 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms