RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 FAM162BQ5T6X4 162 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 FMC1Q96HJ9 113 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 MAP1LC3BQ9GZQ8 125 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 FLG2Q5D862 2391 aaPredicted RBP11.85□□□□□ -0.51
PCF11-206ENST00000533018 A0A087WWL8 130 aa11.84□□□□□ -0.51
PCF11-206ENST00000533018 M0R381 172 aa11.84□□□□□ -0.51
PCF11-206ENST00000533018 ARPC5O15511 151 aa11.84□□□□□ -0.51
PCF11-206ENST00000533018 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
PCF11-206ENST00000533018 TPT1P13693 172 aaKnown RBP11.84□□□□□ -0.51
PCF11-206ENST00000533018 UFSP1Q6NVU6 142 aa11.84□□□□□ -0.51
PCF11-206ENST00000533018 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
PCF11-206ENST00000533018 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
PCF11-206ENST00000533018 WFDC2Q14508 124 aa11.82□□□□□ -0.52
PCF11-206ENST00000533018 DNLZQ5SXM8 178 aa11.82□□□□□ -0.52
PCF11-206ENST00000533018 AKR1C3P42330 323 aa11.81□□□□□ -0.52
PCF11-206ENST00000533018 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
PCF11-206ENST00000533018 FAM30AQ9NZY2 134 aa11.81□□□□□ -0.52
PCF11-206ENST00000533018 ZNF674Q2M3X9 581 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 KCNIP4Q6PIL6 250 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 COX8CQ7Z4L0 72 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 ZFP82Q8N141 532 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 RMI2Q96E14 147 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 CYTL1Q9NRR1 136 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 COX11Q9Y6N1 276 aa11.8□□□□□ -0.52
PCF11-206ENST00000533018 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 A0A087WX48 190 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 LTAP01374 205 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 SEC11BP0C7V7 166 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 FHITP49789 147 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 LINC01559Q495D7 138 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 TCEAL7Q9BRU2 100 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 KLK12Q9UKR0 248 aa11.79□□□□□ -0.52
PCF11-206ENST00000533018 A0A1B0GV50 99 aa11.78□□□□□ -0.52
PCF11-206ENST00000533018 G3V3Q6 166 aa11.78□□□□□ -0.52
PCF11-206ENST00000533018 SMLR1H3BR10 107 aa11.78□□□□□ -0.52
PCF11-206ENST00000533018 PAGE4O60829 102 aa11.78□□□□□ -0.52
PCF11-206ENST00000533018 RPL36AP83881 106 aaKnown RBP11.78□□□□□ -0.52
PCF11-206ENST00000533018 RGS21Q2M5E4 152 aa11.78□□□□□ -0.52
PCF11-206ENST00000533018 NIT1Q86X76 327 aa11.78□□□□□ -0.52
PCF11-206ENST00000533018 RPL36ALQ969Q0 106 aaKnown RBP11.78□□□□□ -0.52
PCF11-206ENST00000533018 TRBV6-1A0A0K0K1D8 114 aa11.77□□□□□ -0.53
PCF11-206ENST00000533018 C1QBP02746 253 aa11.77□□□□□ -0.53
PCF11-206ENST00000533018 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.53
PCF11-206ENST00000533018 UBE2WQ96B02 151 aa11.77□□□□□ -0.53
PCF11-206ENST00000533018 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
PCF11-206ENST00000533018 RBFOX3A6NFN3 312 aa11.76□□□□□ -0.53
PCF11-206ENST00000533018 FAM213BQ8TBF2 198 aa11.76□□□□□ -0.53
PCF11-206ENST00000533018 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
PCF11-206ENST00000533018 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
PCF11-206ENST00000533018 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
PCF11-206ENST00000533018 ELOBQ15370 118 aa11.75□□□□□ -0.53
PCF11-206ENST00000533018 ZNF56Q15929 161 aa11.75□□□□□ -0.53
PCF11-206ENST00000533018 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
PCF11-206ENST00000533018 PFDN1O60925 122 aa11.74□□□□□ -0.53
PCF11-206ENST00000533018 S100A9P06702 114 aaKnown RBP11.74□□□□□ -0.53
PCF11-206ENST00000533018 SSTP61278 116 aa11.74□□□□□ -0.53
PCF11-206ENST00000533018 RPL19P84098 196 aaKnown RBP11.74□□□□□ -0.53
PCF11-206ENST00000533018 Q8N976 141 aa11.74□□□□□ -0.53
PCF11-206ENST00000533018 SCO2A0A1W2PP80 73 aa11.73□□□□□ -0.53
PCF11-206ENST00000533018 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
PCF11-206ENST00000533018 UBE2D3P61077 147 aa11.73□□□□□ -0.53
PCF11-206ENST00000533018 UBE2D2P62837 147 aa11.73□□□□□ -0.53
PCF11-206ENST00000533018 BAGE2Q86Y30 109 aa11.73□□□□□ -0.53
PCF11-206ENST00000533018 CHCHD7Q9BUK0 85 aa11.73□□□□□ -0.53
PCF11-206ENST00000533018 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 RAB4BP61018 213 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 PRR27Q6MZM9 219 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 Q6ZSA8 131 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 KCNRGQ8N5I3 272 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
PCF11-206ENST00000533018 OR10AG1Q8NH19 301 aa11.72□□□□□ -0.53
PCF11-206ENST00000533018 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
PCF11-206ENST00000533018 UMAD1C9J7I0 102 aa11.71□□□□□ -0.53
PCF11-206ENST00000533018 F5H697 171 aa11.71□□□□□ -0.53
PCF11-206ENST00000533018 J3QL48 77 aa11.71□□□□□ -0.53
PCF11-206ENST00000533018 Q0VG73 95 aa11.71□□□□□ -0.53
PCF11-206ENST00000533018 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.53
PCF11-206ENST00000533018 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.53
PCF11-206ENST00000533018 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
PCF11-206ENST00000533018 CRPP02741 224 aa11.7□□□□□ -0.54
PCF11-206ENST00000533018 ZNF345Q14585 488 aa11.7□□□□□ -0.54
PCF11-206ENST00000533018 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
PCF11-206ENST00000533018 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
PCF11-206ENST00000533018 H2AFB1P0C5Y9 115 aa11.69□□□□□ -0.54
PCF11-206ENST00000533018 NEXN-AS1Q8NBZ9 246 aa11.69□□□□□ -0.54
PCF11-206ENST00000533018 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
PCF11-206ENST00000533018 C1orf43Q9BWL3 253 aa11.69□□□□□ -0.54
PCF11-206ENST00000533018 A0A0D9SG52 128 aa11.68□□□□□ -0.54
PCF11-206ENST00000533018 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
PCF11-206ENST00000533018 SMIM17P0DL12 118 aa11.68□□□□□ -0.54
PCF11-206ENST00000533018 TMUB2Q71RG4 321 aa11.68□□□□□ -0.54
PCF11-206ENST00000533018 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
PCF11-206ENST00000533018 MLST8Q9BVC4 326 aa11.68□□□□□ -0.54
PCF11-206ENST00000533018 BCL2L11O43521 198 aa11.67□□□□□ -0.54
PCF11-206ENST00000533018 CXCL1P09341 107 aa11.67□□□□□ -0.54
PCF11-206ENST00000533018 SCXQ7RTU7 201 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms