RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TMEM167AQ8TBQ9 72 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 AGRNO00468 2067 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 IGKV1-16P04430 117 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 IGLC6P0CF74 106 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 DIAPH2-AS1Q14236 149 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 LINC00643Q86TS7 51 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 CD177Q8N6Q3 437 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 SMIM2Q9BVW6 85 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 MGAM2Q2M2H8 2515 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 TRBV19A0A075B6N1 114 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 TMEM178BH3BS89 294 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 J3QQQ9 107 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 PHLDA1Q8WV24 401 aaPredicted RBP5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 V9GYY9 64 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 DCHS2Q6V1P9 2916 aa5.3□□□□□ -1.56
TGFBR3-209ENST00000532540 IGHV4-61A0A0C4DH41 118 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 NDUFA4L2Q9NRX3 87 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 PEMTQ9UBM1 199 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 ADAMTS20P59510 1910 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 TRAV41A0A0B4J266 112 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 GATA1P15976 413 aaPredicted RBP5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 HRCT1Q6UXD1 115 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 THAP8Q8NA92 274 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 SMR3AQ99954 134 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 SLC50A1Q9BRV3 221 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 PRO0461Q9UI25 63 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 STAB1Q9NY15 2570 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 TRBV7-3A0A075B6L6 115 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 IGKV1D-17A0A075B6S4 117 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 hADV29S1A0JD25 119 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 RUSC1-AS1Q66K80 236 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 TMEM14CQ9P0S9 112 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 TRAV12-1A0A0B4J245 112 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 LGALS9O00182 355 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 BRWD1-AS2P59051 145 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 NPC2P61916 151 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 PRR25Q96S07 402 aa5.29□□□□□ -1.56
TGFBR3-209ENST00000532540 SRRM4A7MD48 611 aaKnown RBP5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 RS1O15537 224 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 PDE6HQ13956 83 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 AJUBAQ96IF1 538 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 SHANK2-AS3Q9BTD1 123 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 A0A0B4J2C4 111 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 LINC01619G3V211 115 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 CRLF1O75462 422 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 TMEM258P61165 79 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 SIGLEC9Q9Y336 463 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 S4R3C0 116 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 IGHV3-35A0A0C4DH35 117 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 SRRM5B3KS81 715 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 C15orf65H3BRN8 121 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 GP9P14770 177 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 C16orf92Q96LL3 132 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 DPH3P1Q9H4G8 78 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 HHLA3Q9XRX5 114 aa5.28□□□□□ -1.56
TGFBR3-209ENST00000532540 TRAV26-2A0A0B4J265 109 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 RBAKDNA6NC62 111 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 MRPS12O15235 138 aaKnown RBP5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 COX7CP15954 63 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 WT1-ASQ06250 92 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 FAM74A4Q5TZK3 123 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 MSRB1Q9NZV6 116 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 SORL1Q92673 2214 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 ZANQ9Y493 2812 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 NDUFC2O95298 119 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 ZNF134P52741 427 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 LINC00526Q96FQ7 95 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 TMEM243Q9BU79 118 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 TP53TG1Q9Y2A0 90 aa5.27□□□□□ -1.57
TGFBR3-209ENST00000532540 ECSCRQ19T08 205 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 KRTAP27-1Q3LI81 207 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 IGKV3-7A0A075B6H7 116 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 IGLV3-9A0A075B6K5 115 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 SMCPP49901 116 aaPredicted RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 UBE2D3P61077 147 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 UBE2D2P62837 147 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 DEFB113Q30KQ7 82 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 TMEM200BQ69YZ2 307 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 C14orf178Q8N769 122 aaPredicted RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 C11orf68Q9H3H3 251 aaKnown RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 HCFC1P51610 2035 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 RBMY1BA6NDE4 496 aaKnown RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 RBMY1EA6NEQ0 496 aaKnown RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 VCYO14598 125 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 RBMY1DP0C7P1 496 aaKnown RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 RBMY1A1P0DJD3 496 aaKnown RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 RBMY1CP0DJD4 496 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 RBMY1FQ15415 496 aaKnown RBP5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 MUSTN1Q8IVN3 82 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 C8orf31Q8N9H6 132 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 MDFICQ9P1T7 246 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 CTSZQ9UBR2 303 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 ICOSQ9Y6W8 199 aa5.26□□□□□ -1.57
TGFBR3-209ENST00000532540 A0A096LNJ9 63 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms