RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TOR2AQ5JU69 321 aa11.16□□□□□ -0.62
CPSF1-207ENST00000531727 TCEAL7Q9BRU2 100 aa11.16□□□□□ -0.62
CPSF1-207ENST00000531727 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
CPSF1-207ENST00000531727 ARPC5O15511 151 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 C1QBP02746 253 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 ZNF674Q2M3X9 581 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 LINC01559Q495D7 138 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 FAM74A4Q5TZK3 123 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 STOML3Q8TAV4 291 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 SFRP2Q96HF1 295 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
CPSF1-207ENST00000531727 A0A087WWL8 130 aa11.14□□□□□ -0.63
CPSF1-207ENST00000531727 LTAP01374 205 aa11.14□□□□□ -0.63
CPSF1-207ENST00000531727 TPT1P13693 172 aaKnown RBP11.14□□□□□ -0.63
CPSF1-207ENST00000531727 CST9LP1Q5W188 147 aa11.14□□□□□ -0.63
CPSF1-207ENST00000531727 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
CPSF1-207ENST00000531727 HERC1Q15751 4861 aa11.13□□□□□ -0.63
CPSF1-207ENST00000531727 TMSB15BA0A087X1C1 80 aa11.13□□□□□ -0.63
CPSF1-207ENST00000531727 M0R381 172 aa11.13□□□□□ -0.63
CPSF1-207ENST00000531727 ZFP82Q8N141 532 aa11.13□□□□□ -0.63
CPSF1-207ENST00000531727 URGCP-MRPS24S4R325 110 aa11.13□□□□□ -0.63
CPSF1-207ENST00000531727 LECT2O14960 151 aa11.12□□□□□ -0.63
CPSF1-207ENST00000531727 AKR1C3P42330 323 aa11.12□□□□□ -0.63
CPSF1-207ENST00000531727 NIT1Q86X76 327 aa11.12□□□□□ -0.63
CPSF1-207ENST00000531727 COX11Q9Y6N1 276 aa11.12□□□□□ -0.63
CPSF1-207ENST00000531727 SRRM2Q9UQ35 2752 aaKnown RBP11.11□□□□□ -0.63
CPSF1-207ENST00000531727 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
CPSF1-207ENST00000531727 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
CPSF1-207ENST00000531727 RGS21Q2M5E4 152 aa11.11□□□□□ -0.63
CPSF1-207ENST00000531727 Q6ZSA8 131 aa11.11□□□□□ -0.63
CPSF1-207ENST00000531727 RMI2Q96E14 147 aa11.11□□□□□ -0.63
CPSF1-207ENST00000531727 PAGE4O60829 102 aa11.1□□□□□ -0.63
CPSF1-207ENST00000531727 BAALCQ8WXS3 180 aa11.1□□□□□ -0.63
CPSF1-207ENST00000531727 MYCBP2O75592 4640 aa11.09□□□□□ -0.63
CPSF1-207ENST00000531727 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
CPSF1-207ENST00000531727 SMLR1H3BR10 107 aa11.09□□□□□ -0.63
CPSF1-207ENST00000531727 UBE2D3P61077 147 aa11.09□□□□□ -0.63
CPSF1-207ENST00000531727 UBE2D2P62837 147 aa11.09□□□□□ -0.63
CPSF1-207ENST00000531727 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
CPSF1-207ENST00000531727 KCNRGQ8N5I3 272 aa11.09□□□□□ -0.63
CPSF1-207ENST00000531727 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
CPSF1-207ENST00000531727 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
CPSF1-207ENST00000531727 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
CPSF1-207ENST00000531727 TRBV7-3A0A075B6L6 115 aa11.08□□□□□ -0.64
CPSF1-207ENST00000531727 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
CPSF1-207ENST00000531727 S100A9P06702 114 aaKnown RBP11.08□□□□□ -0.64
CPSF1-207ENST00000531727 ZNF345Q14585 488 aa11.08□□□□□ -0.64
CPSF1-207ENST00000531727 FAM213BQ8TBF2 198 aa11.08□□□□□ -0.64
CPSF1-207ENST00000531727 SFT2D1Q8WV19 159 aa11.08□□□□□ -0.64
CPSF1-207ENST00000531727 MBD3L1Q8WWY6 194 aa11.08□□□□□ -0.64
CPSF1-207ENST00000531727 DNAJC30Q96LL9 226 aa11.08□□□□□ -0.64
CPSF1-207ENST00000531727 A0A087WX48 190 aa11.07□□□□□ -0.64
CPSF1-207ENST00000531727 CXCL1P09341 107 aa11.07□□□□□ -0.64
CPSF1-207ENST00000531727 RPL19P84098 196 aaKnown RBP11.07□□□□□ -0.64
CPSF1-207ENST00000531727 ELOBQ15370 118 aa11.07□□□□□ -0.64
CPSF1-207ENST00000531727 SCO2A0A1W2PP80 73 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 UMAD1C9J7I0 102 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 PFDN1O60925 122 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 RAB4BP61018 213 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 KCNIP4Q6PIL6 250 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 Q8N976 141 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 OR10G8Q8NGN5 311 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 UBE2WQ96B02 151 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
CPSF1-207ENST00000531727 A0A1B0GV50 99 aa11.05□□□□□ -0.64
CPSF1-207ENST00000531727 ATRAIDQ6UW56 229 aa11.05□□□□□ -0.64
CPSF1-207ENST00000531727 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
CPSF1-207ENST00000531727 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
CPSF1-207ENST00000531727 RBFOX3A6NFN3 312 aa11.04□□□□□ -0.64
CPSF1-207ENST00000531727 SNAI2O43623 268 aa11.04□□□□□ -0.64
CPSF1-207ENST00000531727 ZNF56Q15929 161 aa11.04□□□□□ -0.64
CPSF1-207ENST00000531727 LINC01620Q4KN68 170 aa11.04□□□□□ -0.64
CPSF1-207ENST00000531727 BAGE2Q86Y30 109 aa11.04□□□□□ -0.64
CPSF1-207ENST00000531727 NEXN-AS1Q8NBZ9 246 aa11.04□□□□□ -0.64
CPSF1-207ENST00000531727 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
CPSF1-207ENST00000531727 A0A0D9SG52 128 aa11.03□□□□□ -0.64
CPSF1-207ENST00000531727 HMSDA8MTL9 139 aa11.03□□□□□ -0.64
CPSF1-207ENST00000531727 PLA2G1BP04054 148 aaKnown RBP11.03□□□□□ -0.64
CPSF1-207ENST00000531727 Q0VG73 95 aa11.03□□□□□ -0.64
CPSF1-207ENST00000531727 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
CPSF1-207ENST00000531727 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
CPSF1-207ENST00000531727 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
CPSF1-207ENST00000531727 KANTRA0A1W2PQU2 76 aa11.02□□□□□ -0.65
CPSF1-207ENST00000531727 TMEM262E9PQX1 116 aa11.02□□□□□ -0.65
CPSF1-207ENST00000531727 BCL2L11O43521 198 aa11.02□□□□□ -0.65
CPSF1-207ENST00000531727 H2AFB1P0C5Y9 115 aa11.02□□□□□ -0.65
CPSF1-207ENST00000531727 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
CPSF1-207ENST00000531727 SPANXN1Q5VSR9 72 aa11.01□□□□□ -0.65
CPSF1-207ENST00000531727 TMUB2Q71RG4 321 aa11.01□□□□□ -0.65
CPSF1-207ENST00000531727 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
CPSF1-207ENST00000531727 FLG2Q5D862 2391 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-207ENST00000531727 MUC21A0A0G2JKD1 596 aa11□□□□□ -0.65
CPSF1-207ENST00000531727 MUC21A0A140T8X8 626 aa11□□□□□ -0.65
CPSF1-207ENST00000531727 ENHOQ6UWT2 76 aa11□□□□□ -0.65
CPSF1-207ENST00000531727 C15orf54Q8N8G6 183 aa11□□□□□ -0.65
CPSF1-207ENST00000531727 SREK1IP1Q8N9Q2 155 aaPredicted RBP11□□□□□ -0.65
CPSF1-207ENST00000531727 C1orf43Q9BWL3 253 aa11□□□□□ -0.65
CPSF1-207ENST00000531727 CRPP02741 224 aa10.99□□□□□ -0.65
CPSF1-207ENST00000531727 RPL35P42766 123 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms