RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 TNFSF18Q9UNG2 199 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 KRBOX1C9JBD0 128 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 RHODO00212 210 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 PEX7O00628 323 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 ARMS2P0C7Q2 107 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 CRIP1P50238 77 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 ZNF726P1Q15940 193 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 SYT8Q8NBV8 401 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 ZC2HC1AQ96GY0 325 aa12.04□□□□□ -0.48
SSSCA1-206ENST00000531405 OR11H4Q8NGC9 324 aa12.03□□□□□ -0.48
SSSCA1-206ENST00000531405 CIRBP-AS1Q8TBR5 109 aa12.03□□□□□ -0.48
SSSCA1-206ENST00000531405 UBR4Q5T4S7 5183 aa12.02□□□□□ -0.49
SSSCA1-206ENST00000531405 SH2D1AO60880 128 aa12.02□□□□□ -0.49
SSSCA1-206ENST00000531405 Q5BKY6 102 aa12.02□□□□□ -0.49
SSSCA1-206ENST00000531405 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
SSSCA1-206ENST00000531405 A0A087WX48 190 aa12.01□□□□□ -0.49
SSSCA1-206ENST00000531405 TMSB15BA0A087X1C1 80 aa12.01□□□□□ -0.49
SSSCA1-206ENST00000531405 M0R381 172 aa12.01□□□□□ -0.49
SSSCA1-206ENST00000531405 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
SSSCA1-206ENST00000531405 SFRP2Q96HF1 295 aa12.01□□□□□ -0.49
SSSCA1-206ENST00000531405 PHLDA3Q9Y5J5 127 aa12.01□□□□□ -0.49
SSSCA1-206ENST00000531405 CTXND1A0A1B0GTU2 59 aa12□□□□□ -0.49
SSSCA1-206ENST00000531405 FAM74A7A6NL05 159 aa12□□□□□ -0.49
SSSCA1-206ENST00000531405 SEC11BP0C7V7 166 aa12□□□□□ -0.49
SSSCA1-206ENST00000531405 FAM162BQ5T6X4 162 aa11.99□□□□□ -0.49
SSSCA1-206ENST00000531405 ATRAIDQ6UW56 229 aa11.99□□□□□ -0.49
SSSCA1-206ENST00000531405 TPT1P13693 172 aaKnown RBP11.98□□□□□ -0.49
SSSCA1-206ENST00000531405 UBE2D3P61077 147 aa11.98□□□□□ -0.49
SSSCA1-206ENST00000531405 UBE2D2P62837 147 aa11.98□□□□□ -0.49
SSSCA1-206ENST00000531405 ELOBQ15370 118 aa11.98□□□□□ -0.49
SSSCA1-206ENST00000531405 KCNIP4Q6PIL6 250 aa11.98□□□□□ -0.49
SSSCA1-206ENST00000531405 HIST1H2BAQ96A08 127 aa11.98□□□□□ -0.49
SSSCA1-206ENST00000531405 CHCHD7Q9BUK0 85 aa11.98□□□□□ -0.49
SSSCA1-206ENST00000531405 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
SSSCA1-206ENST00000531405 SERTAD4-AS1Q5TG53 156 aa11.97□□□□□ -0.49
SSSCA1-206ENST00000531405 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
SSSCA1-206ENST00000531405 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
SSSCA1-206ENST00000531405 MED28Q9H204 178 aa11.97□□□□□ -0.49
SSSCA1-206ENST00000531405 ZFP30Q9Y2G7 519 aa11.97□□□□□ -0.49
SSSCA1-206ENST00000531405 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 TRBV10-1A0A0K0K1A3 114 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 TMEM262E9PQX1 116 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 IGLV2-8P01709 118 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 LINC01559Q495D7 138 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 ENHOQ6UWT2 76 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 ZFP82Q8N141 532 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 C1orf43Q9BWL3 253 aa11.96□□□□□ -0.49
SSSCA1-206ENST00000531405 BORCS7-ASMTA0A0B4J1R7 106 aa11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 OXTP01178 125 aa11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 UBE2G1P62253 170 aa11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 Q0VG73 95 aa11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 ZNF674Q2M3X9 581 aa11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 C15orf54Q8N8G6 183 aa11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 INO80EQ8NBZ0 244 aaPredicted RBP11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 FMC1Q96HJ9 113 aa11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 NKX6-2Q9C056 277 aaPredicted RBP11.95□□□□□ -0.5
SSSCA1-206ENST00000531405 FXYD6-FXYD2A0A087WZ82 144 aa11.94□□□□□ -0.5
SSSCA1-206ENST00000531405 MPV17L2Q567V2 206 aa11.94□□□□□ -0.5
SSSCA1-206ENST00000531405 TRBV6-8A0A0A6YYG3 113 aa11.93□□□□□ -0.5
SSSCA1-206ENST00000531405 CRPP02741 224 aa11.93□□□□□ -0.5
SSSCA1-206ENST00000531405 C14orf177Q52M58 125 aa11.93□□□□□ -0.5
SSSCA1-206ENST00000531405 AKR1C8PQ5T2L2 129 aa11.93□□□□□ -0.5
SSSCA1-206ENST00000531405 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
SSSCA1-206ENST00000531405 MAP1LC3B2A6NCE7 125 aa11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 USP17L23D6RBM5 183 aa11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 LTAP01374 205 aa11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 ANGP03950 147 aaKnown RBP11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 GIPP09681 153 aaPredicted RBP11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 ZNF56Q15929 161 aa11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 MAP1LC3BQ9GZQ8 125 aa11.92□□□□□ -0.5
SSSCA1-206ENST00000531405 HNRNPA3P51991 378 aaKnown RBP11.91□□□□□ -0.5
SSSCA1-206ENST00000531405 RAB4BP61018 213 aa11.91□□□□□ -0.5
SSSCA1-206ENST00000531405 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
SSSCA1-206ENST00000531405 RPL19P84098 196 aaKnown RBP11.91□□□□□ -0.5
SSSCA1-206ENST00000531405 CST9LP1Q5W188 147 aa11.91□□□□□ -0.5
SSSCA1-206ENST00000531405 OR10AG1Q8NH19 301 aa11.91□□□□□ -0.5
SSSCA1-206ENST00000531405 TRBV6-1A0A0K0K1D8 114 aa11.9□□□□□ -0.5
SSSCA1-206ENST00000531405 PTTG1O95997 202 aa11.9□□□□□ -0.5
SSSCA1-206ENST00000531405 CHCHD5Q9BSY4 110 aa11.9□□□□□ -0.5
SSSCA1-206ENST00000531405 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
SSSCA1-206ENST00000531405 MUC21A0A140T8X8 626 aa11.89□□□□□ -0.51
SSSCA1-206ENST00000531405 PRSS1P07477 247 aa11.89□□□□□ -0.51
SSSCA1-206ENST00000531405 AKR1C3P42330 323 aa11.89□□□□□ -0.51
SSSCA1-206ENST00000531405 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
SSSCA1-206ENST00000531405 CLPSL2Q6UWE3 100 aa11.89□□□□□ -0.51
SSSCA1-206ENST00000531405 PLA2G2DQ9UNK4 145 aa11.89□□□□□ -0.51
SSSCA1-206ENST00000531405 DAZAP1Q96EP5 407 aaKnown RBP11.88□□□□□ -0.51
SSSCA1-206ENST00000531405 FHITP49789 147 aa11.87□□□□□ -0.51
SSSCA1-206ENST00000531405 NTM-AS1Q6ZSK4 140 aa11.87□□□□□ -0.51
SSSCA1-206ENST00000531405 STOML3Q8TAV4 291 aa11.87□□□□□ -0.51
SSSCA1-206ENST00000531405 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
SSSCA1-206ENST00000531405 G3V3Q6 166 aa11.86□□□□□ -0.51
SSSCA1-206ENST00000531405 PANO1I0J062 215 aa11.86□□□□□ -0.51
SSSCA1-206ENST00000531405 PAGE4O60829 102 aa11.86□□□□□ -0.51
SSSCA1-206ENST00000531405 SSTP61278 116 aa11.86□□□□□ -0.51
SSSCA1-206ENST00000531405 MIAQ16674 131 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms