RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TRAV2A0A0B4J234 112 aa11.43□□□□□ -0.58
USP47-207ENST00000527733 MRAPQ8TCY5 172 aa11.43□□□□□ -0.58
USP47-207ENST00000527733 ACANP16112 2415 aa11.43□□□□□ -0.58
USP47-207ENST00000527733 DNAH14Q0VDD8 3507 aa11.42□□□□□ -0.58
USP47-207ENST00000527733 MED14OSP0DP75 135 aa11.42□□□□□ -0.58
USP47-207ENST00000527733 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
USP47-207ENST00000527733 ANKRD17O75179 2603 aaKnown RBP11.42□□□□□ -0.58
USP47-207ENST00000527733 LINC00587B1AMM8 73 aa11.42□□□□□ -0.58
USP47-207ENST00000527733 TMEM238C9JI98 176 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 K7EMI3 77 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 CTRLP40313 264 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 TIMM21Q9BVV7 248 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 NHP2Q9NX24 153 aaKnown RBP11.41□□□□□ -0.58
USP47-207ENST00000527733 FLNBO75369 2602 aaKnown RBP11.41□□□□□ -0.58
USP47-207ENST00000527733 GATA1P15976 413 aaPredicted RBP11.41□□□□□ -0.58
USP47-207ENST00000527733 LINC00158P58513 81 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 CHAC1Q9BUX1 264 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 SPART-AS1P0CW21 52 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 HSD52Q0P140 79 aa11.41□□□□□ -0.58
USP47-207ENST00000527733 GAGE6Q13070 117 aa11.4□□□□□ -0.58
USP47-207ENST00000527733 DNAL4O96015 105 aa11.4□□□□□ -0.58
USP47-207ENST00000527733 IGLV2-8P01709 118 aa11.4□□□□□ -0.58
USP47-207ENST00000527733 MLST8Q9BVC4 326 aa11.4□□□□□ -0.58
USP47-207ENST00000527733 SMAD5-AS1Q9Y6J3 95 aa11.4□□□□□ -0.58
USP47-207ENST00000527733 Q6ZWC4 215 aa11.39□□□□□ -0.59
USP47-207ENST00000527733 STPG4Q8N801 248 aa11.39□□□□□ -0.59
USP47-207ENST00000527733 TEX48A0A1B0GUV7 120 aa11.39□□□□□ -0.59
USP47-207ENST00000527733 ORAOV1Q8WV07 137 aa11.39□□□□□ -0.59
USP47-207ENST00000527733 ODF3Q96PU9 254 aa11.39□□□□□ -0.59
USP47-207ENST00000527733 ZNF80P51504 273 aaPredicted RBP11.39□□□□□ -0.59
USP47-207ENST00000527733 SMR3AQ99954 134 aa11.39□□□□□ -0.59
USP47-207ENST00000527733 SUMO4Q6EEV6 95 aa11.39□□□□□ -0.59
USP47-207ENST00000527733 VCANP13611 3396 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 H3BMM0 161 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 DEFB135Q30KP9 77 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 LGALS9BQ3B8N2 356 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 COA6Q5JTJ3 125 aaKnown RBP11.38□□□□□ -0.59
USP47-207ENST00000527733 LGALS9CQ6DKI2 356 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 A0A096LPF7 62 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 A0A0J9YY99 117 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 MYMXA0A1B0GTQ4 84 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 CRLF1O75462 422 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 ATP5G1P05496 136 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 DEFB125Q8N687 156 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 C11orf68Q9H3H3 251 aaKnown RBP11.38□□□□□ -0.59
USP47-207ENST00000527733 RBMY1BA6NDE4 496 aaKnown RBP11.38□□□□□ -0.59
USP47-207ENST00000527733 RBMY1EA6NEQ0 496 aaKnown RBP11.38□□□□□ -0.59
USP47-207ENST00000527733 RBMY1DP0C7P1 496 aaKnown RBP11.38□□□□□ -0.59
USP47-207ENST00000527733 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
USP47-207ENST00000527733 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
USP47-207ENST00000527733 PRIMA1Q86XR5 153 aa11.37□□□□□ -0.59
USP47-207ENST00000527733 RPL39LQ96EH5 51 aaKnown RBP11.37□□□□□ -0.59
USP47-207ENST00000527733 DNAJC30Q96LL9 226 aa11.37□□□□□ -0.59
USP47-207ENST00000527733 CRIP2P52943 208 aaPredicted RBP11.37□□□□□ -0.59
USP47-207ENST00000527733 SHISA2Q6UWI4 295 aa11.37□□□□□ -0.59
USP47-207ENST00000527733 LINC00322Q6ZN03 302 aaPredicted RBP11.37□□□□□ -0.59
USP47-207ENST00000527733 ZNF292O60281 2723 aa11.37□□□□□ -0.59
USP47-207ENST00000527733 ZNF664Q8N3J9 261 aa11.37□□□□□ -0.59
USP47-207ENST00000527733 MDFICQ9P1T7 246 aa11.37□□□□□ -0.59
USP47-207ENST00000527733 F8VRH5 84 aa11.36□□□□□ -0.59
USP47-207ENST00000527733 CIDEAO60543 219 aa11.36□□□□□ -0.59
USP47-207ENST00000527733 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
USP47-207ENST00000527733 EYSQ5T1H1 3165 aa11.36□□□□□ -0.59
USP47-207ENST00000527733 PSCAO43653 123 aa11.36□□□□□ -0.59
USP47-207ENST00000527733 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
USP47-207ENST00000527733 TMEM263Q8WUH6 116 aaKnown RBP11.35□□□□□ -0.59
USP47-207ENST00000527733 K7ERU9 68 aa11.35□□□□□ -0.59
USP47-207ENST00000527733 ESDP10768 282 aa11.35□□□□□ -0.59
USP47-207ENST00000527733 ZNF747Q9BV97 191 aa11.35□□□□□ -0.59
USP47-207ENST00000527733 K7EQD1 137 aa11.34□□□□□ -0.59
USP47-207ENST00000527733 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
USP47-207ENST00000527733 A0A1B0GV90 55 aa11.33□□□□□ -0.6
USP47-207ENST00000527733 H3BUT2 72 aa11.33□□□□□ -0.6
USP47-207ENST00000527733 HIST2H2BDQ6DRA6 164 aa11.33□□□□□ -0.6
USP47-207ENST00000527733 C18orf65Q6ZTR6 163 aa11.33□□□□□ -0.6
USP47-207ENST00000527733 NDUFA7O95182 113 aa11.33□□□□□ -0.6
USP47-207ENST00000527733 GYPEP15421 78 aa11.33□□□□□ -0.6
USP47-207ENST00000527733 MRPL23Q16540 153 aaKnown RBP11.33□□□□□ -0.6
USP47-207ENST00000527733 LAMA1P25391 3075 aa11.32□□□□□ -0.6
USP47-207ENST00000527733 ANGP03950 147 aaKnown RBP11.32□□□□□ -0.6
USP47-207ENST00000527733 FRMD6-AS1P0C7T7 363 aa11.32□□□□□ -0.6
USP47-207ENST00000527733 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
USP47-207ENST00000527733 SPCS1Q9Y6A9 102 aa11.32□□□□□ -0.6
USP47-207ENST00000527733 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
USP47-207ENST00000527733 ZNF580Q9UK33 172 aa11.32□□□□□ -0.6
USP47-207ENST00000527733 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
USP47-207ENST00000527733 VPS13AQ96RL7 3174 aa11.31□□□□□ -0.6
USP47-207ENST00000527733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
USP47-207ENST00000527733 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
USP47-207ENST00000527733 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
USP47-207ENST00000527733 DAZ4Q86SG3 579 aaKnown RBP11.31□□□□□ -0.6
USP47-207ENST00000527733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
USP47-207ENST00000527733 DAZ3Q9NR90 486 aaKnown RBP11.31□□□□□ -0.6
USP47-207ENST00000527733 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 BRI3O95415 125 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 IGLC6P0CF74 106 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 SPANXA1Q9NS26 97 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 SH2D6Q7Z4S9 175 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms