RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 JMJD8Q96S16 334 aa13.03□□□□□ -0.32
USH1C-205ENST00000527020 CHTOPQ9Y3Y2 248 aaKnown RBP13.03□□□□□ -0.32
USH1C-205ENST00000527020 ZNF469Q96JG9 3925 aaPredicted RBP13.03□□□□□ -0.32
USH1C-205ENST00000527020 C9orf118A6NHY6 69 aa13.03□□□□□ -0.32
USH1C-205ENST00000527020 CDKN1BP46527 198 aa13.03□□□□□ -0.32
USH1C-205ENST00000527020 AMTNQ6UX39 209 aa13.03□□□□□ -0.32
USH1C-205ENST00000527020 RNASE8Q8TDE3 154 aaKnown RBP13.02□□□□□ -0.33
USH1C-205ENST00000527020 APCP25054 2843 aa13.02□□□□□ -0.33
USH1C-205ENST00000527020 CREBBPQ92793 2442 aa13.02□□□□□ -0.33
USH1C-205ENST00000527020 FXYD2P54710 66 aa13.01□□□□□ -0.33
USH1C-205ENST00000527020 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
USH1C-205ENST00000527020 Q8N2B8 174 aa13.01□□□□□ -0.33
USH1C-205ENST00000527020 IGHV1OR15-1A0A075B7D0 117 aa13.01□□□□□ -0.33
USH1C-205ENST00000527020 SLURP1P55000 103 aa13.01□□□□□ -0.33
USH1C-205ENST00000527020 KRTAP1-3Q8IUG1 177 aa13.01□□□□□ -0.33
USH1C-205ENST00000527020 DUSP14O95147 198 aaKnown RBP13□□□□□ -0.33
USH1C-205ENST00000527020 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
USH1C-205ENST00000527020 FOXI2Q6ZQN5 318 aa13□□□□□ -0.33
USH1C-205ENST00000527020 LRRC75A-AS1Q8N1F1 130 aa13□□□□□ -0.33
USH1C-205ENST00000527020 PRSS29PA6NIE9 313 aa13□□□□□ -0.33
USH1C-205ENST00000527020 TSHBP01222 138 aa13□□□□□ -0.33
USH1C-205ENST00000527020 DEFB104AQ8WTQ1 72 aa13□□□□□ -0.33
USH1C-205ENST00000527020 Q96MF0 132 aa13□□□□□ -0.33
USH1C-205ENST00000527020 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
USH1C-205ENST00000527020 H3BUT2 72 aa12.99□□□□□ -0.33
USH1C-205ENST00000527020 GCSHP23434 173 aa12.99□□□□□ -0.33
USH1C-205ENST00000527020 MORN3Q6PF18 240 aaPredicted RBP12.99□□□□□ -0.33
USH1C-205ENST00000527020 ZFP2Q6ZN57 461 aa12.99□□□□□ -0.33
USH1C-205ENST00000527020 F5H697 171 aa12.98□□□□□ -0.33
USH1C-205ENST00000527020 CRYGDP07320 174 aa12.98□□□□□ -0.33
USH1C-205ENST00000527020 RAB37Q96AX2 223 aa12.98□□□□□ -0.33
USH1C-205ENST00000527020 AKAP9Q99996 3911 aa12.98□□□□□ -0.33
USH1C-205ENST00000527020 RBMY1A1P0DJD3 496 aaKnown RBP12.98□□□□□ -0.33
USH1C-205ENST00000527020 RBMY1CP0DJD4 496 aa12.98□□□□□ -0.33
USH1C-205ENST00000527020 RBMY1FQ15415 496 aaKnown RBP12.98□□□□□ -0.33
USH1C-205ENST00000527020 FAM74A4Q5TZK3 123 aa12.98□□□□□ -0.33
USH1C-205ENST00000527020 UFSP1Q6NVU6 142 aa12.98□□□□□ -0.33
USH1C-205ENST00000527020 TRBV6-5A0A0K0K1A5 114 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 CYSLTR1Q9Y271 337 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 TP53TG1Q9Y2A0 90 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 TRBV27A0A0K0K1C4 114 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 SDHAF1A6NFY7 115 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 VCYO14598 125 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 CEND1Q8N111 149 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 TM2D2Q9BX73 214 aa12.97□□□□□ -0.33
USH1C-205ENST00000527020 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
USH1C-205ENST00000527020 M0QY20 66 aa12.96□□□□□ -0.33
USH1C-205ENST00000527020 SYT8Q8NBV8 401 aa12.96□□□□□ -0.33
USH1C-205ENST00000527020 RPL39P62891 51 aaKnown RBP12.96□□□□□ -0.34
USH1C-205ENST00000527020 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
USH1C-205ENST00000527020 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
USH1C-205ENST00000527020 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
USH1C-205ENST00000527020 DUX3Q96PT4 197 aa12.95□□□□□ -0.34
USH1C-205ENST00000527020 GAGE10A6NGK3 116 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 A8MTW9 85 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 SMIM13P0DJ93 91 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 KIR2DL4Q99706 377 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 EPG5Q9HCE0 2579 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 NBPF19A0A087WUL8 3843 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 IGLV4-69A0A075B6H9 119 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 RBMY1BA6NDE4 496 aaKnown RBP12.94□□□□□ -0.34
USH1C-205ENST00000527020 RBMY1EA6NEQ0 496 aaKnown RBP12.94□□□□□ -0.34
USH1C-205ENST00000527020 LINC01619G3V211 115 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 K7ERJ3 54 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 RBMY1DP0C7P1 496 aaKnown RBP12.94□□□□□ -0.34
USH1C-205ENST00000527020 ZNF56Q15929 161 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 OR11H1Q8NG94 326 aa12.94□□□□□ -0.34
USH1C-205ENST00000527020 OR11H12B2RN74 326 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 E9PLD3 99 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 DEFB131AP59861 70 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 RBX1P62877 108 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 OR11H2Q8NH07 326 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 TLN2Q9Y4G6 2542 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 A0A1W2PPM0 123 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 GAGE12BA1L429 117 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 K7EP34 96 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 HIST2H2BDQ6DRA6 164 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 CST9LQ9H4G1 147 aa12.93□□□□□ -0.34
USH1C-205ENST00000527020 ZNF256Q9Y2P7 627 aaPredicted RBP12.93□□□□□ -0.34
USH1C-205ENST00000527020 TAL2Q16559 108 aa12.92□□□□□ -0.34
USH1C-205ENST00000527020 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
USH1C-205ENST00000527020 C4orf3Q8WVX3 66 aa12.92□□□□□ -0.34
USH1C-205ENST00000527020 PRADC1Q9BSG0 188 aa12.92□□□□□ -0.34
USH1C-205ENST00000527020 TRGV11A0A075B6L2 103 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 LINC01549A6NIU2 74 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 C11orf86A6NJI1 115 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 H3BMM0 161 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 TIMM17AQ99595 171 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 NACAE9PAV3 2078 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 TRBV7-3A0A075B6L6 115 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 GTF2H5Q6ZYL4 71 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 DLX4Q92988 240 aaPredicted RBP12.91□□□□□ -0.34
USH1C-205ENST00000527020 TMEM141Q96I45 108 aa12.91□□□□□ -0.34
USH1C-205ENST00000527020 NHP2Q9NX24 153 aaKnown RBP12.91□□□□□ -0.34
USH1C-205ENST00000527020 PMVKQ15126 192 aa12.9□□□□□ -0.34
USH1C-205ENST00000527020 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms