RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 HMCN2Q8NDA2 5059 aa13.29□□□□□ -0.28
PABPC1-217ENST00000521067 PLA2G1BP04054 148 aaKnown RBP13.29□□□□□ -0.28
PABPC1-217ENST00000521067 FAM74A4Q5TZK3 123 aa13.29□□□□□ -0.28
PABPC1-217ENST00000521067 SCXQ7RTU7 201 aa13.29□□□□□ -0.28
PABPC1-217ENST00000521067 INO80EQ8NBZ0 244 aaPredicted RBP13.29□□□□□ -0.28
PABPC1-217ENST00000521067 HIST1H2BAQ96A08 127 aa13.29□□□□□ -0.28
PABPC1-217ENST00000521067 SFRP2Q96HF1 295 aa13.29□□□□□ -0.28
PABPC1-217ENST00000521067 KLK12Q9UKR0 248 aa13.29□□□□□ -0.28
PABPC1-217ENST00000521067 RHODO00212 210 aa13.28□□□□□ -0.28
PABPC1-217ENST00000521067 GIPP09681 153 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-217ENST00000521067 SYT8Q8NBV8 401 aa13.28□□□□□ -0.28
PABPC1-217ENST00000521067 OR11H4Q8NGC9 324 aa13.28□□□□□ -0.28
PABPC1-217ENST00000521067 COX11Q9Y6N1 276 aa13.28□□□□□ -0.28
PABPC1-217ENST00000521067 IGKV2D-24A0A075B6R9 120 aa13.27□□□□□ -0.29
PABPC1-217ENST00000521067 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
PABPC1-217ENST00000521067 BORCS7-ASMTA0A0B4J1R7 106 aa13.27□□□□□ -0.29
PABPC1-217ENST00000521067 KRTAP29-1A8MX34 341 aaPredicted RBP13.27□□□□□ -0.29
PABPC1-217ENST00000521067 ZFP30Q9Y2G7 519 aa13.27□□□□□ -0.29
PABPC1-217ENST00000521067 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 FXYD6-FXYD2A0A087WZ82 144 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 RBFOX3A6NFN3 312 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 M0R381 172 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 PTTG1O95997 202 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 KRTAP10-4P60372 401 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-217ENST00000521067 ZNF674Q2M3X9 581 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 FAM162BQ5T6X4 162 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 Q8N976 141 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 UBE2WQ96B02 151 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 NKX6-2Q9C056 277 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-217ENST00000521067 PHLDA3Q9Y5J5 127 aa13.26□□□□□ -0.29
PABPC1-217ENST00000521067 G3V3Q6 166 aa13.25□□□□□ -0.29
PABPC1-217ENST00000521067 LINC01559Q495D7 138 aa13.25□□□□□ -0.29
PABPC1-217ENST00000521067 URGCP-MRPS24S4R325 110 aa13.25□□□□□ -0.29
PABPC1-217ENST00000521067 AKR1C8PQ5T2L2 129 aa13.24□□□□□ -0.29
PABPC1-217ENST00000521067 RMI2Q96E14 147 aa13.24□□□□□ -0.29
PABPC1-217ENST00000521067 FMC1Q96HJ9 113 aa13.24□□□□□ -0.29
PABPC1-217ENST00000521067 CYTL1Q9NRR1 136 aa13.24□□□□□ -0.29
PABPC1-217ENST00000521067 LTAP01374 205 aa13.23□□□□□ -0.29
PABPC1-217ENST00000521067 TPT1P13693 172 aaKnown RBP13.23□□□□□ -0.29
PABPC1-217ENST00000521067 UBE2D3P61077 147 aa13.23□□□□□ -0.29
PABPC1-217ENST00000521067 UBE2D2P62837 147 aa13.23□□□□□ -0.29
PABPC1-217ENST00000521067 ATRAIDQ6UW56 229 aa13.23□□□□□ -0.29
PABPC1-217ENST00000521067 DEFB104AQ8WTQ1 72 aa13.23□□□□□ -0.29
PABPC1-217ENST00000521067 CHAC1Q9BUX1 264 aa13.23□□□□□ -0.29
PABPC1-217ENST00000521067 A0A087WX48 190 aa13.22□□□□□ -0.29
PABPC1-217ENST00000521067 TRBV6-1A0A0K0K1D8 114 aa13.22□□□□□ -0.29
PABPC1-217ENST00000521067 MAP1LC3B2A6NCE7 125 aa13.22□□□□□ -0.29
PABPC1-217ENST00000521067 CIRBP-AS1Q8TBR5 109 aa13.22□□□□□ -0.29
PABPC1-217ENST00000521067 MAP1LC3BQ9GZQ8 125 aa13.22□□□□□ -0.29
PABPC1-217ENST00000521067 TRBV7-3A0A075B6L6 115 aa13.21□□□□□ -0.29
PABPC1-217ENST00000521067 TRBV10-1A0A0K0K1A3 114 aa13.21□□□□□ -0.29
PABPC1-217ENST00000521067 FHITP49789 147 aa13.21□□□□□ -0.29
PABPC1-217ENST00000521067 UBE2G1P62253 170 aa13.21□□□□□ -0.29
PABPC1-217ENST00000521067 ENHOQ6UWT2 76 aa13.21□□□□□ -0.29
PABPC1-217ENST00000521067 ZFP82Q8N141 532 aa13.21□□□□□ -0.29
PABPC1-217ENST00000521067 CHCHD7Q9BUK0 85 aa13.21□□□□□ -0.29
PABPC1-217ENST00000521067 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
PABPC1-217ENST00000521067 RPL36AP83881 106 aaKnown RBP13.2□□□□□ -0.3
PABPC1-217ENST00000521067 OR10G8Q8NGN5 311 aa13.2□□□□□ -0.3
PABPC1-217ENST00000521067 RPL36ALQ969Q0 106 aaKnown RBP13.2□□□□□ -0.3
PABPC1-217ENST00000521067 RPL19P84098 196 aaKnown RBP13.19□□□□□ -0.3
PABPC1-217ENST00000521067 ELOBQ15370 118 aa13.19□□□□□ -0.3
PABPC1-217ENST00000521067 CST9LP1Q5W188 147 aa13.19□□□□□ -0.3
PABPC1-217ENST00000521067 TRBV6-8A0A0A6YYG3 113 aa13.18□□□□□ -0.3
PABPC1-217ENST00000521067 TMEM262E9PQX1 116 aa13.18□□□□□ -0.3
PABPC1-217ENST00000521067 UBR4Q5T4S7 5183 aa13.18□□□□□ -0.3
PABPC1-217ENST00000521067 PRR27Q6MZM9 219 aa13.17□□□□□ -0.3
PABPC1-217ENST00000521067 NEXN-AS1Q8NBZ9 246 aa13.17□□□□□ -0.3
PABPC1-217ENST00000521067 OR10AG1Q8NH19 301 aa13.17□□□□□ -0.3
PABPC1-217ENST00000521067 ARPC5O15511 151 aa13.16□□□□□ -0.3
PABPC1-217ENST00000521067 PAGE4O60829 102 aa13.16□□□□□ -0.3
PABPC1-217ENST00000521067 AKR1C3P42330 323 aa13.16□□□□□ -0.3
PABPC1-217ENST00000521067 RAB4BP61018 213 aa13.16□□□□□ -0.3
PABPC1-217ENST00000521067 Q0VG73 95 aa13.16□□□□□ -0.3
PABPC1-217ENST00000521067 MPV17L2Q567V2 206 aa13.16□□□□□ -0.3
PABPC1-217ENST00000521067 TCEAL7Q9BRU2 100 aa13.16□□□□□ -0.3
PABPC1-217ENST00000521067 MUC21A0A0G2JKD1 596 aa13.15□□□□□ -0.3
PABPC1-217ENST00000521067 MUC21A0A140T8X8 626 aa13.15□□□□□ -0.3
PABPC1-217ENST00000521067 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
PABPC1-217ENST00000521067 C15orf54Q8N8G6 183 aa13.15□□□□□ -0.3
PABPC1-217ENST00000521067 MLST8Q9BVC4 326 aa13.15□□□□□ -0.3
PABPC1-217ENST00000521067 BATF3Q9NR55 127 aa13.15□□□□□ -0.3
PABPC1-217ENST00000521067 SMLR1H3BR10 107 aa13.14□□□□□ -0.31
PABPC1-217ENST00000521067 SSBP4Q9BWG4 385 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-217ENST00000521067 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
PABPC1-217ENST00000521067 ZNF56Q15929 161 aa13.13□□□□□ -0.31
PABPC1-217ENST00000521067 NTM-AS1Q6ZSK4 140 aa13.13□□□□□ -0.31
PABPC1-217ENST00000521067 STOML3Q8TAV4 291 aa13.13□□□□□ -0.31
PABPC1-217ENST00000521067 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
PABPC1-217ENST00000521067 SNAI2O43623 268 aa13.12□□□□□ -0.31
PABPC1-217ENST00000521067 MBD3L1Q8WWY6 194 aa13.12□□□□□ -0.31
PABPC1-217ENST00000521067 A0A1B0GV50 99 aa13.11□□□□□ -0.31
PABPC1-217ENST00000521067 USP17L23D6RBM5 183 aa13.11□□□□□ -0.31
PABPC1-217ENST00000521067 IGLV2-8P01709 118 aa13.11□□□□□ -0.31
PABPC1-217ENST00000521067 ANGP03950 147 aaKnown RBP13.11□□□□□ -0.31
PABPC1-217ENST00000521067 SSTP61278 116 aa13.11□□□□□ -0.31
PABPC1-217ENST00000521067 BAGE2Q86Y30 109 aa13.11□□□□□ -0.31
PABPC1-217ENST00000521067 SFT2D1Q8WV19 159 aa13.11□□□□□ -0.31
PABPC1-217ENST00000521067 ZNF471Q9BX82 626 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-217ENST00000521067 KIF25-AS1Q9Y6Z4 181 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms