RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 DMBT1Q9UGM3 2413 aaPredicted RBP13□□□□□ -0.33
PABPC1-215ENST00000520804 MAP1LC3B2A6NCE7 125 aa12.99□□□□□ -0.33
PABPC1-215ENST00000520804 G3V3Q6 166 aa12.99□□□□□ -0.33
PABPC1-215ENST00000520804 LECT2O14960 151 aa12.99□□□□□ -0.33
PABPC1-215ENST00000520804 FAM74A4Q5TZK3 123 aa12.99□□□□□ -0.33
PABPC1-215ENST00000520804 MAP1LC3BQ9GZQ8 125 aa12.99□□□□□ -0.33
PABPC1-215ENST00000520804 PHLDA3Q9Y5J5 127 aa12.99□□□□□ -0.33
PABPC1-215ENST00000520804 TRBV6-1A0A0K0K1D8 114 aa12.98□□□□□ -0.33
PABPC1-215ENST00000520804 UBE2G1P62253 170 aa12.98□□□□□ -0.33
PABPC1-215ENST00000520804 ZNF674Q2M3X9 581 aa12.98□□□□□ -0.33
PABPC1-215ENST00000520804 SFRP2Q96HF1 295 aa12.98□□□□□ -0.33
PABPC1-215ENST00000520804 CYTL1Q9NRR1 136 aa12.98□□□□□ -0.33
PABPC1-215ENST00000520804 SRRM2Q9UQ35 2752 aaKnown RBP12.98□□□□□ -0.33
PABPC1-215ENST00000520804 A0A087WWL8 130 aa12.97□□□□□ -0.33
PABPC1-215ENST00000520804 TPT1P13693 172 aaKnown RBP12.97□□□□□ -0.33
PABPC1-215ENST00000520804 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
PABPC1-215ENST00000520804 Q6ZSA8 131 aa12.97□□□□□ -0.33
PABPC1-215ENST00000520804 NIT1Q86X76 327 aa12.97□□□□□ -0.33
PABPC1-215ENST00000520804 TCEAL7Q9BRU2 100 aa12.97□□□□□ -0.33
PABPC1-215ENST00000520804 COX11Q9Y6N1 276 aa12.97□□□□□ -0.33
PABPC1-215ENST00000520804 URGCP-MRPS24S4R325 110 aa12.97□□□□□ -0.33
PABPC1-215ENST00000520804 TMSB15BA0A087X1C1 80 aa12.96□□□□□ -0.33
PABPC1-215ENST00000520804 M0R381 172 aa12.96□□□□□ -0.33
PABPC1-215ENST00000520804 LTAP01374 205 aa12.96□□□□□ -0.33
PABPC1-215ENST00000520804 FHITP49789 147 aa12.96□□□□□ -0.33
PABPC1-215ENST00000520804 FLG2Q5D862 2391 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-215ENST00000520804 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-215ENST00000520804 ARPC5O15511 151 aa12.95□□□□□ -0.34
PABPC1-215ENST00000520804 CST9LP1Q5W188 147 aa12.95□□□□□ -0.34
PABPC1-215ENST00000520804 ZFP82Q8N141 532 aa12.95□□□□□ -0.34
PABPC1-215ENST00000520804 STOML3Q8TAV4 291 aa12.95□□□□□ -0.34
PABPC1-215ENST00000520804 BAALCQ8WXS3 180 aa12.95□□□□□ -0.34
PABPC1-215ENST00000520804 RMI2Q96E14 147 aa12.95□□□□□ -0.34
PABPC1-215ENST00000520804 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
PABPC1-215ENST00000520804 SEC11BP0C7V7 166 aa12.94□□□□□ -0.34
PABPC1-215ENST00000520804 DNAJC30Q96LL9 226 aa12.94□□□□□ -0.34
PABPC1-215ENST00000520804 AKR1C3P42330 323 aa12.93□□□□□ -0.34
PABPC1-215ENST00000520804 KLK12Q9UKR0 248 aa12.93□□□□□ -0.34
PABPC1-215ENST00000520804 IGKV2D-24A0A075B6R9 120 aa12.92□□□□□ -0.34
PABPC1-215ENST00000520804 UBE2D3P61077 147 aa12.92□□□□□ -0.34
PABPC1-215ENST00000520804 UBE2D2P62837 147 aa12.92□□□□□ -0.34
PABPC1-215ENST00000520804 RPL36AP83881 106 aaKnown RBP12.92□□□□□ -0.34
PABPC1-215ENST00000520804 RPL36ALQ969Q0 106 aaKnown RBP12.92□□□□□ -0.34
PABPC1-215ENST00000520804 CHCHD7Q9BUK0 85 aa12.92□□□□□ -0.34
PABPC1-215ENST00000520804 TRBV7-3A0A075B6L6 115 aa12.91□□□□□ -0.34
PABPC1-215ENST00000520804 A0A087WX48 190 aa12.91□□□□□ -0.34
PABPC1-215ENST00000520804 Q8N976 141 aa12.91□□□□□ -0.34
PABPC1-215ENST00000520804 PAGE4O60829 102 aa12.9□□□□□ -0.34
PABPC1-215ENST00000520804 PLA2G1BP04054 148 aaKnown RBP12.9□□□□□ -0.34
PABPC1-215ENST00000520804 ELOBQ15370 118 aa12.9□□□□□ -0.34
PABPC1-215ENST00000520804 UBE2WQ96B02 151 aa12.9□□□□□ -0.34
PABPC1-215ENST00000520804 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
PABPC1-215ENST00000520804 LINC01620Q4KN68 170 aa12.89□□□□□ -0.35
PABPC1-215ENST00000520804 KCNIP4Q6PIL6 250 aa12.89□□□□□ -0.35
PABPC1-215ENST00000520804 LINC00528Q8N1L1 170 aa12.89□□□□□ -0.35
PABPC1-215ENST00000520804 OR10G8Q8NGN5 311 aa12.89□□□□□ -0.35
PABPC1-215ENST00000520804 S100A9P06702 114 aaKnown RBP12.88□□□□□ -0.35
PABPC1-215ENST00000520804 RAB4BP61018 213 aa12.88□□□□□ -0.35
PABPC1-215ENST00000520804 RGS21Q2M5E4 152 aa12.88□□□□□ -0.35
PABPC1-215ENST00000520804 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
PABPC1-215ENST00000520804 MBD3L1Q8WWY6 194 aa12.88□□□□□ -0.35
PABPC1-215ENST00000520804 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
PABPC1-215ENST00000520804 CXCL1P09341 107 aa12.87□□□□□ -0.35
PABPC1-215ENST00000520804 RPL19P84098 196 aaKnown RBP12.87□□□□□ -0.35
PABPC1-215ENST00000520804 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
PABPC1-215ENST00000520804 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
PABPC1-215ENST00000520804 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
PABPC1-215ENST00000520804 MLST8Q9BVC4 326 aa12.87□□□□□ -0.35
PABPC1-215ENST00000520804 TRBV6-8A0A0A6YYG3 113 aa12.86□□□□□ -0.35
PABPC1-215ENST00000520804 Q0VG73 95 aa12.86□□□□□ -0.35
PABPC1-215ENST00000520804 ZNF345Q14585 488 aa12.86□□□□□ -0.35
PABPC1-215ENST00000520804 SCXQ7RTU7 201 aa12.86□□□□□ -0.35
PABPC1-215ENST00000520804 FAM213BQ8TBF2 198 aa12.86□□□□□ -0.35
PABPC1-215ENST00000520804 SCO2A0A1W2PP80 73 aa12.85□□□□□ -0.35
PABPC1-215ENST00000520804 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
PABPC1-215ENST00000520804 TMEM262E9PQX1 116 aa12.85□□□□□ -0.35
PABPC1-215ENST00000520804 J3QL48 77 aa12.85□□□□□ -0.35
PABPC1-215ENST00000520804 ZNF56Q15929 161 aa12.85□□□□□ -0.35
PABPC1-215ENST00000520804 PRR27Q6MZM9 219 aa12.85□□□□□ -0.35
PABPC1-215ENST00000520804 NEXN-AS1Q8NBZ9 246 aa12.85□□□□□ -0.35
PABPC1-215ENST00000520804 ZNF471Q9BX82 626 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-215ENST00000520804 A0A1B0GV50 99 aa12.84□□□□□ -0.35
PABPC1-215ENST00000520804 SNAI2O43623 268 aa12.84□□□□□ -0.35
PABPC1-215ENST00000520804 BAGE2Q86Y30 109 aa12.84□□□□□ -0.35
PABPC1-215ENST00000520804 SSBP4Q9BWG4 385 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-215ENST00000520804 PFDN1O60925 122 aa12.83□□□□□ -0.36
PABPC1-215ENST00000520804 ENHOQ6UWT2 76 aa12.83□□□□□ -0.36
PABPC1-215ENST00000520804 C1orf43Q9BWL3 253 aa12.83□□□□□ -0.36
PABPC1-215ENST00000520804 OR5AL1P0C617 328 aa12.82□□□□□ -0.36
PABPC1-215ENST00000520804 MPV17L2Q567V2 206 aa12.82□□□□□ -0.36
PABPC1-215ENST00000520804 SPANXN1Q5VSR9 72 aa12.82□□□□□ -0.36
PABPC1-215ENST00000520804 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
PABPC1-215ENST00000520804 CHAC1Q9BUX1 264 aa12.82□□□□□ -0.36
PABPC1-215ENST00000520804 MUC21A0A0G2JKD1 596 aa12.81□□□□□ -0.36
PABPC1-215ENST00000520804 MUC21A0A140T8X8 626 aa12.81□□□□□ -0.36
PABPC1-215ENST00000520804 CRPP02741 224 aa12.81□□□□□ -0.36
PABPC1-215ENST00000520804 C15orf54Q8N8G6 183 aa12.81□□□□□ -0.36
PABPC1-215ENST00000520804 HMSDA8MTL9 139 aa12.8□□□□□ -0.36
PABPC1-215ENST00000520804 KRTAP29-1A8MX34 341 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-215ENST00000520804 C14orf177Q52M58 125 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms