RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ZNF738Q8NE65 137 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 LINC00477Q96M19 166 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 C9orf85Q96MD7 179 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 ODF3Q96PU9 254 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 MS4A6AQ9H2W1 248 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 DAZ1Q9NQZ3 744 aaKnown RBP3.32□□□□□ -1.88
PABPC1-212ENST00000519622 HSPB8Q9UJY1 196 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 HHLA3Q9XRX5 114 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 SPG11Q96JI7 2443 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 PTPN13Q12923 2485 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 ANKRD17O75179 2603 aaKnown RBP3.32□□□□□ -1.88
PABPC1-212ENST00000519622 APCP25054 2843 aa3.32□□□□□ -1.88
PABPC1-212ENST00000519622 LRRK2Q5S007 2527 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 A0A0J9YX75 114 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 M0R381 172 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 LGALS9O00182 355 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 GNRH2O43555 120 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 LGALS1P09382 135 aaKnown RBP3.31□□□□□ -1.88
PABPC1-212ENST00000519622 ZNF25P17030 456 aaPredicted RBP3.31□□□□□ -1.88
PABPC1-212ENST00000519622 SRD5A1P18405 259 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 S100A7P31151 101 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 CKS2P33552 79 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 HINT1P49773 126 aaPredicted RBP3.31□□□□□ -1.88
PABPC1-212ENST00000519622 MPV17L2Q567V2 206 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 Q5PR19 223 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 COL5A1-AS1Q5SY13 56 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 TMEM78Q5T7P6 136 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 KLHDC1Q8N7A1 406 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 TMEM158Q8WZ71 300 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 IFI27L1Q96BM0 104 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 RPL39LQ96EH5 51 aaKnown RBP3.31□□□□□ -1.88
PABPC1-212ENST00000519622 C18orf15Q96N68 181 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 SMIM2Q9BVW6 85 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 MAP1LC3CQ9BXW4 147 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 MAP1LC3AQ9H492 121 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 JPT2Q9H910 190 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 PEF1Q9UBV8 284 aaKnown RBP3.31□□□□□ -1.88
PABPC1-212ENST00000519622 VPREB3Q9UKI3 123 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 MYO18BQ8IUG5 2567 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
PABPC1-212ENST00000519622 CSPG4Q6UVK1 2322 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 TRAV21A0A0B4J279 112 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 A0A0G2JLM5 398 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 GAGE12JA6NER3 117 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 CCL25O15444 150 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 TSHBP01222 138 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 LEPP41159 167 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 RPL32P62910 135 aaKnown RBP3.3□□□□□ -1.88
PABPC1-212ENST00000519622 BATFQ16520 125 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 DEFB113Q30KQ7 82 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 HIST2H2BDQ6DRA6 164 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 SLC25A34Q6PIV7 304 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 PCP2Q8IVA1 136 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 LRRC75A-AS1Q8N1F1 130 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 FAM104AQ969W3 186 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 MRAP2Q96G30 205 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 TTTY13Q9BZ97 58 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
PABPC1-212ENST00000519622 BEX4Q9NWD9 120 aaPredicted RBP3.3□□□□□ -1.88
PABPC1-212ENST00000519622 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 CENPEQ02224 2701 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 ITPR3Q14573 2671 aa3.3□□□□□ -1.88
PABPC1-212ENST00000519622 AGRNO00468 2067 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 TRBV6-5A0A0K0K1A5 114 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 H0Y8G0 127 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 J3KRW8 73 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 CRYGDP07320 174 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 ZNF688P0C7X2 276 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 SMIM17P0DL12 118 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 HLA-DRB4P13762 266 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 COX6B1P14854 86 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 HOXD3P31249 432 aaPredicted RBP3.29□□□□□ -1.88
PABPC1-212ENST00000519622 RNASE4P34096 147 aaKnown RBP3.29□□□□□ -1.88
PABPC1-212ENST00000519622 ASIPP42127 132 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 POLR2KP53803 58 aaKnown RBP3.29□□□□□ -1.88
PABPC1-212ENST00000519622 UFSP1Q6NVU6 142 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 Q6ZSV7 163 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 MAPKAPK5-AS1Q8N8E1 139 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 OR1N2Q8NGR9 330 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 OR10J6PQ8NGY7 276 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 PHLDA1Q8WV24 401 aaPredicted RBP3.29□□□□□ -1.88
PABPC1-212ENST00000519622 TOMM6Q96B49 74 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 ESM1Q9NQ30 184 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
PABPC1-212ENST00000519622 HLA-DRB4X5D2U9 266 aa3.29□□□□□ -1.88
PABPC1-212ENST00000519622 ABCA12Q86UK0 2595 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 TRAV12-1A0A0B4J245 112 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 TRAV8-6A0A0B4J262 113 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 C7orf71A4D174 169 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 K7EP13 123 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 TGFAP01135 160 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 RIPPLY3P57055 190 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 SYNJ2BPP57105 145 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 DEFB136Q30KP8 78 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 HIST2H2BCQ6DN03 193 aa3.28□□□□□ -1.88
PABPC1-212ENST00000519622 NEGR1Q7Z3B1 354 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms