RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ARFGEF3Q5TH69 2177 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 POLEQ07864 2286 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 OVOL2Q9BRP0 275 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV3-73A0A0B4J1V6 119 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 ACYP1P07311 99 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 MDFIQ99750 246 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 H3BT86 120 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 H3BUX3 64 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 INAFM2P0DMQ5 153 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 CACNA1HO95180 2353 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 HTTP42858 3142 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 ATP5J2P56134 94 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 EBI3Q14213 229 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 C9orf153Q5TBE3 101 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 C11orf21Q9P2W6 132 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 ICOSQ9Y6W8 199 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 DSCAMO60469 2012 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 BRD3OSQ6XYD6 125 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 BPESC1Q9GZL8 116 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 PCNX1Q96RV3 2341 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 A0A0J9YXV3 536 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 RPL32P62910 135 aaKnown RBP5.07□□□□□ -1.6
CPNE3-203ENST00000517490 IGLV2-18A0A075B6J9 118 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV3OR16-12A0A075B7B8 117 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 RBMY1BA6NDE4 496 aaKnown RBP5.07□□□□□ -1.6
CPNE3-203ENST00000517490 RBMY1EA6NEQ0 496 aaKnown RBP5.07□□□□□ -1.6
CPNE3-203ENST00000517490 RHODO00212 210 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 RBMY1DP0C7P1 496 aaKnown RBP5.07□□□□□ -1.6
CPNE3-203ENST00000517490 RBMY1A1P0DJD3 496 aaKnown RBP5.07□□□□□ -1.6
CPNE3-203ENST00000517490 RBMY1CP0DJD4 496 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 P0DMU3 169 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 FAM231AP0DMU4 169 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 FAM231CP0DMU5 169 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 XGP55808 180 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 NDUFV3P56181 108 aaKnown RBP5.07□□□□□ -1.6
CPNE3-203ENST00000517490 C20orf173Q96LM9 149 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 KLK9Q9UKQ9 250 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 SPTBN1Q01082 2364 aaKnown RBP5.07□□□□□ -1.6
CPNE3-203ENST00000517490 TANC2Q9HCD6 1990 aa5.07□□□□□ -1.6
CPNE3-203ENST00000517490 ADARB2-AS1A8MUL3 147 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 SPINK13Q1W4C9 94 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 Q8N1Y9 231 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 CCL19Q99731 98 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 A0A0C4DFX4 3053 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV3-30P01768 117 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 CRPP02741 224 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV3-30-5P0DP03 117 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 UBE2D1P51668 147 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 PSMG3-AS1Q96PY0 264 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 PIP4P2Q8N4L2 257 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 C5orf56Q8N8D9 126 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 PRIMA1Q86XR5 153 aa5.06□□□□□ -1.6
CPNE3-203ENST00000517490 TRAV12-2A0A075B6T6 113 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 A8MZ25 164 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 SMIM20Q8N5G0 67 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 SPANXCQ9NY87 97 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 ACACAQ13085 2346 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 Q8N6K4 173 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 ZFAND2AQ8N6M9 145 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 C20orf203Q8NBC4 194 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 TMEM126AQ9H061 195 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 MDFICQ9P1T7 246 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 ABCA4P78363 2273 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV3-33P01772 117 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 UBE2D3P61077 147 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 UBE2D2P62837 147 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 ITLN2Q8WWU7 325 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-203ENST00000517490 TOMM7Q9P0U1 55 aa5.05□□□□□ -1.6
CPNE3-203ENST00000517490 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
CPNE3-203ENST00000517490 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV4OR15-8A0A075B7B6 117 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 A0A087WW49 117 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 TMEM223A0PJW6 202 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 A0A0J9YXY3 114 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 F8W735 103 aaPredicted RBP5.04□□□□□ -1.6
CPNE3-203ENST00000517490 RS1O15537 224 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 GRNP28799 593 aaKnown RBP5.04□□□□□ -1.6
CPNE3-203ENST00000517490 HERVK_113P63121 156 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 CD164L2Q6UWJ8 174 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 ZGRF1Q86YA3 2104 aa5.04□□□□□ -1.6
CPNE3-203ENST00000517490 IGKV3OR2-268A0A0C4DH90 116 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 TRBV30A0A0K0K1B3 111 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 K7ENP7 123 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 IGF1P05019 195 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 ZFP36P26651 326 aaKnown RBP5.03□□□□□ -1.6
CPNE3-203ENST00000517490 EDA2RQ9HAV5 297 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 TECTAO75443 2155 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV1-58A0A0C4DH39 117 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV3-30-3P0DP02 117 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 NSUN5P1Q3KNT7 163 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 FBXL19-AS1Q494R0 122 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 CHD7Q9P2D1 2997 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 KNCNA6PVL3 124 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 K7EMT4 169 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 DEFB1P60022 68 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 JPT2Q9H910 190 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 TRBV6-5A0A0K0K1A5 114 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 LGALS9O00182 355 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms