RNA–Protein interactions for RNA: ENST00000516601.1

RNU5B-3P-201, Transcript of RNA, U5B small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5B-3P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5B-3P-201ENST00000516601 TRAV12-3A0A0B4J271 114 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 APOC1P02654 83 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 PYYP10082 97 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SARNPP82979 210 aaKnown RBP0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPCS2Q15005 226 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 S100A7L2Q5SY68 101 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SLC48A1Q6P1K1 146 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 C10orf99Q6UWK7 81 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 TMEM141Q96I45 108 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SAR1AQ9NR31 198 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 TMEM14BQ9NUH8 114 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 TMEM242Q9NWH2 141 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPAG17Q6Q759 2223 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 QRICH2Q9H0J4 1663 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ARAP2Q8WZ64 1704 aa0.58□□□□□ -2.32
RNU5B-3P-201ENST00000516601 F5P12259 2224 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 TEX49A0A1B0GTD5 131 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 CCDC179H3BU77 68 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 IL5P05113 134 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 RPL37P61927 97 aaKnown RBP0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 RRAS2P62070 204 aaPredicted RBP0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 KLKP1Q107X0 134 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPINK9Q5DT21 86 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPANXN1Q5VSR9 72 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ARL11Q969Q4 196 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 PDCD10Q9BUL8 212 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 LINC00470Q9BZP3 86 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 TMEM191AQ9H0A3 160 aa0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 PAIP2BQ9ULR5 123 aaKnown RBP0.57□□□□□ -2.32
RNU5B-3P-201ENST00000516601 KIAA0100Q14667 2235 aaKnown RBP0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 FAM25AB3EWG3 89 aa0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 FAM25CB3EWG5 89 aa0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 FAM25GB3EWG6 89 aa0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ELOF1P60002 83 aaKnown RBP0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 KCNRGQ8N5I3 272 aa0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 PEG3Q9GZU2 1588 aa0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 TCHHQ07283 1943 aa0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ROBO1Q9Y6N7 1651 aa0.56□□□□□ -2.32
RNU5B-3P-201ENST00000516601 IFT172Q9UG01 1749 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 A0A087WTM6 91 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 HIST1H1DP16402 221 aaKnown RBP0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 CCL3L1P16619 93 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 GUCA1AP43080 201 aaPredicted RBP0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 UBE2G1P62253 170 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SCIMPQ6UWF3 145 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 C20orf197Q8N268 126 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPTSSAQ969W0 71 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 DPH3Q96FX2 82 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 DSCR8Q96T75 97 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SHROOM2Q13796 1616 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 DAPK1P53355 1430 aa0.55□□□□□ -2.32
RNU5B-3P-201ENST00000516601 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 CFTRP13569 1480 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 TRAV12-2A0A075B6T6 113 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 K7EP13 123 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SNCGO76070 127 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 EMX2Q04743 252 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPINK13Q1W4C9 94 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 C9orf116Q5BN46 136 aaPredicted RBP0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 RPL7L1Q6DKI1 246 aaKnown RBP0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 NDUFA11Q86Y39 141 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPTSSBQ8NFR3 76 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 FAM103A1Q9BTL3 118 aaKnown RBP0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ASH1LQ9NR48 2969 aaKnown RBP0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 COA4Q9NYJ1 87 aa0.54□□□□□ -2.32
RNU5B-3P-201ENST00000516601 LOC100130705A0A1B0GUX0 176 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SPAARA0A1B0GVQ0 90 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 PIPP12273 146 aaPredicted RBP0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 FXYD6P3P58550 94 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 C4orf33Q8N1A6 199 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 LSM10Q969L4 123 aaKnown RBP0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 SEC11CQ9BY50 192 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 C10orf95Q9H7T3 257 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 RPRMQ9NS64 109 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 BET1LQ9NYM9 111 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 CCDC167Q9P0B6 97 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ZNF469Q96JG9 3925 aaPredicted RBP0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ROCK2O75116 1388 aaKnown RBP0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 CASKIN1Q8WXD9 1431 aa0.53□□□□□ -2.32
RNU5B-3P-201ENST00000516601 ZNF518AQ6AHZ1 1483 aa0.53□□□□□ -2.33
RNU5B-3P-201ENST00000516601 BCL9LQ86UU0 1499 aa0.53□□□□□ -2.33
RNU5B-3P-201ENST00000516601 SSC5DA1L4H1 1573 aa0.53□□□□□ -2.33
RNU5B-3P-201ENST00000516601 A0A096LNT2 108 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 A0A1B0GV90 55 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 FAM92AA1XBS5 289 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 NDUFB6O95139 128 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 UBE2D1P51668 147 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 SELENOWP63302 87 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 COX7B2Q8TF08 81 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 EIF4G3O43432 1585 aaKnown RBP0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 LRRC37A3O60309 1634 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 PSME4Q14997 1843 aa0.52□□□□□ -2.33
RNU5B-3P-201ENST00000516601 CLPSL1A2RUU4 121 aa0.51□□□□□ -2.33
RNU5B-3P-201ENST00000516601 TET3O43151 1660 aa0.51□□□□□ -2.33
RNU5B-3P-201ENST00000516601 MEIG1Q5JSS6 88 aa0.51□□□□□ -2.33
RNU5B-3P-201ENST00000516601 RPL13AP3Q6NVV1 102 aa0.51□□□□□ -2.33
RNU5B-3P-201ENST00000516601 ZNF236Q9UL36 1845 aa0.5□□□□□ -2.33
RNU5B-3P-201ENST00000516601 LAMC3Q9Y6N6 1575 aa0.5□□□□□ -2.33
RNU5B-3P-201ENST00000516601 RBAKDNA6NC62 111 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms