RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
TCOF1-214ENST00000515035 CTSZQ9UBR2 303 aa10.31□□□□□ -0.76
TCOF1-214ENST00000515035 Q6ZQT7 251 aa10.3□□□□□ -0.76
TCOF1-214ENST00000515035 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-214ENST00000515035 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
TCOF1-214ENST00000515035 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
TCOF1-214ENST00000515035 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
TCOF1-214ENST00000515035 PTPRQQ9UMZ3 2332 aa10.3□□□□□ -0.76
TCOF1-214ENST00000515035 ATP5G1P05496 136 aa10.3□□□□□ -0.76
TCOF1-214ENST00000515035 CTRLP40313 264 aa10.3□□□□□ -0.76
TCOF1-214ENST00000515035 NDUFA11Q86Y39 141 aa10.3□□□□□ -0.76
TCOF1-214ENST00000515035 ARHGAP21Q5T5U3 1957 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 UBE2BP63146 152 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 RMI2Q96E14 147 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 A0A0J9YY99 117 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 ETDCA0A1B0GVM5 59 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 SVIPQ8NHG7 77 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 PIFOQ8TCI5 191 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 IGKV1OR2-108A0A075B7D4 117 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 TCL1BO95988 128 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 CTSGP08311 255 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 TNRC6AQ8NDV7 1962 aaKnown RBP10.29□□□□□ -0.76
TCOF1-214ENST00000515035 APOC4P55056 127 aa10.29□□□□□ -0.76
TCOF1-214ENST00000515035 BUB3O43684 328 aa10.28□□□□□ -0.76
TCOF1-214ENST00000515035 DSCAML1Q8TD84 2053 aa10.28□□□□□ -0.76
TCOF1-214ENST00000515035 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
TCOF1-214ENST00000515035 IGLV11-55A0A075B6I3 123 aa10.28□□□□□ -0.76
TCOF1-214ENST00000515035 IGKV2D-24A0A075B6R9 120 aa10.28□□□□□ -0.76
TCOF1-214ENST00000515035 Q6ZSR3 168 aa10.27□□□□□ -0.77
TCOF1-214ENST00000515035 Q8N1Y9 231 aa10.27□□□□□ -0.77
TCOF1-214ENST00000515035 IGLV10-54A0A075B6I4 117 aa10.26□□□□□ -0.77
TCOF1-214ENST00000515035 CHKB-CPT1BH3BT56 60 aa10.26□□□□□ -0.77
TCOF1-214ENST00000515035 LOXL1Q08397 574 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-214ENST00000515035 IGHV7-81A0A0B4J1V7 117 aa10.26□□□□□ -0.77
TCOF1-214ENST00000515035 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
TCOF1-214ENST00000515035 CAMK2N2Q96S95 79 aa10.26□□□□□ -0.77
TCOF1-214ENST00000515035 COX7A2LO14548 114 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 RITA1Q96K30 269 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 FAM208BQ5VWN6 2430 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 DAZ2Q13117 558 aaKnown RBP10.25□□□□□ -0.77
TCOF1-214ENST00000515035 DAZ4Q86SG3 579 aaKnown RBP10.25□□□□□ -0.77
TCOF1-214ENST00000515035 C14orf132Q9NPU4 83 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 DAZ3Q9NR90 486 aaKnown RBP10.25□□□□□ -0.77
TCOF1-214ENST00000515035 TECTAO75443 2155 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 K7EQD1 137 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 CGB3P0DN86 165 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-214ENST00000515035 H3BQ85 93 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 UQCRQO14949 82 aa10.25□□□□□ -0.77
TCOF1-214ENST00000515035 HOXB4P17483 251 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-214ENST00000515035 PRO3102Q9H379 93 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 FREM1Q5H8C1 2179 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 IGHV1-58A0A0C4DH39 117 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 CENPVL3A0A0U1RRI6 287 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 LHBP01229 141 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 CGB7P0DN87 165 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 C11orf1Q9H5F2 150 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 Q9HAA7 133 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 SPG11Q96JI7 2443 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 RBX1P62877 108 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 C16orf54Q6UWD8 224 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 SPRNQ5BIV9 151 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 APRG1Q8IVJ8 170 aa10.24□□□□□ -0.77
TCOF1-214ENST00000515035 MRPL36Q9P0J6 103 aaKnown RBP10.24□□□□□ -0.77
TCOF1-214ENST00000515035 TRAV23DV6A0A075B6W5 121 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 NPBQ8NG41 125 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 NDUFB1O75438 58 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 IGHV3-30-3P0DP02 117 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 MIR7-3HGQ8N6C7 128 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 RNF152Q8N8N0 203 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 TP73-AS1Q9UF72 201 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 WI2-2373I1.2A0A1W2PRP0 233 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 RNF138Q8WVD3 245 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 AJUBAQ96IF1 538 aa10.23□□□□□ -0.77
TCOF1-214ENST00000515035 GYPEP15421 78 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 DEFB113Q30KQ7 82 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 TRBV6-1A0A0K0K1D8 114 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 TMEM256-PLSCR3K7ERE1 68 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 KRTAP27-1Q3LI81 207 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 PLXNB3Q9ULL4 1909 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 MED14OSP0DP75 135 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 RPL18AQ02543 176 aaKnown RBP10.22□□□□□ -0.77
TCOF1-214ENST00000515035 C20orf203Q8NBC4 194 aa10.22□□□□□ -0.77
TCOF1-214ENST00000515035 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.77
TCOF1-214ENST00000515035 TEX22C9J3V5 150 aa10.21□□□□□ -0.77
TCOF1-214ENST00000515035 NCR3O14931 201 aa10.21□□□□□ -0.77
TCOF1-214ENST00000515035 IGLV2-14P01704 120 aa10.21□□□□□ -0.77
TCOF1-214ENST00000515035 DEFB136Q30KP8 78 aa10.21□□□□□ -0.77
TCOF1-214ENST00000515035 DENND4CQ5VZ89 1909 aa10.21□□□□□ -0.77
TCOF1-214ENST00000515035 GRNP28799 593 aaKnown RBP10.21□□□□□ -0.77
TCOF1-214ENST00000515035 IGLC6P0CF74 106 aa10.21□□□□□ -0.78
TCOF1-214ENST00000515035 TRBV12-3P01733 135 aa10.21□□□□□ -0.78
TCOF1-214ENST00000515035 ZNF503Q96F45 646 aa10.21□□□□□ -0.78
TCOF1-214ENST00000515035 TRBV7-3A0A075B6L6 115 aa10.2□□□□□ -0.78
TCOF1-214ENST00000515035 IGLV2-23P01705 113 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms