RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CRYBG3Q68DQ2 2970 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 SPRY2O43597 315 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 IGHG2P01859 326 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 C5orf47Q569G3 176 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 TTC32Q5I0X7 151 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 GTSCR1Q86UQ5 136 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 GPHB5Q86YW7 130 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
SDHA-216ENST00000514027 SPG11Q96JI7 2443 aa9.52□□□□□ -0.89
SDHA-216ENST00000514027 UTP20O75691 2785 aaKnown RBP9.51□□□□□ -0.89
SDHA-216ENST00000514027 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 A6NDX4 124 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 SNCGO76070 127 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 IGKCP01834 107 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 FCER1GP30273 86 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 F6UB75 175 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 PRSS1P07477 247 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 NRGNQ92686 78 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 USMG5Q96IX5 58 aa9.51□□□□□ -0.89
SDHA-216ENST00000514027 FLNCQ14315 2725 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 M0R381 172 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 S100A4P26447 101 aaKnown RBP9.5□□□□□ -0.89
SDHA-216ENST00000514027 PSMB2P49721 201 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 MAPKAPK5-AS1Q8N8E1 139 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 Q6Q795 121 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 Q8N8P6 123 aa9.5□□□□□ -0.89
SDHA-216ENST00000514027 SOCS3O14543 225 aa9.49□□□□□ -0.89
SDHA-216ENST00000514027 AVPP01185 164 aa9.49□□□□□ -0.89
SDHA-216ENST00000514027 MEIG1Q5JSS6 88 aa9.49□□□□□ -0.89
SDHA-216ENST00000514027 FOXC2Q99958 501 aa9.49□□□□□ -0.89
SDHA-216ENST00000514027 RHPN1-AS1Q9BWJ2 59 aa9.49□□□□□ -0.89
SDHA-216ENST00000514027 CSMD2Q7Z408 3487 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 H3BUA1 57 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 OVOL1O14753 267 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 RNASE4P34096 147 aaKnown RBP9.48□□□□□ -0.89
SDHA-216ENST00000514027 ANKRD29Q8N6D5 301 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 ZFAND2AQ8N6M9 145 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 TMEM126AQ9H061 195 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 TRAV21A0A0B4J279 112 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
SDHA-216ENST00000514027 EDN2P20800 178 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 ASIPP42127 132 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 SBSPONQ8IVN8 264 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 NRACQ8N912 160 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 LENEPQ9Y5L5 61 aa9.48□□□□□ -0.89
SDHA-216ENST00000514027 ACACBO00763 2458 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 A8MWV9 139 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 LINC01619G3V211 115 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 CRLF1O75462 422 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 DPM2O94777 84 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 IGSF10Q6WRI0 2623 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 B4DSR2 109 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 UBE2D3P61077 147 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 UBE2D2P62837 147 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 LAGE3Q14657 143 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 RASL10AQ92737 203 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 DAZ1Q9NQZ3 744 aaKnown RBP9.47□□□□□ -0.89
SDHA-216ENST00000514027 MDFICQ9P1T7 246 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 PHLDA3Q9Y5J5 127 aa9.47□□□□□ -0.89
SDHA-216ENST00000514027 MGPP08493 103 aa9.46□□□□□ -0.89
SDHA-216ENST00000514027 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.89
SDHA-216ENST00000514027 USP9XQ93008 2570 aaPredicted RBP9.46□□□□□ -0.9
SDHA-216ENST00000514027 IGHV4-4A0A075B6R2 117 aa9.46□□□□□ -0.9
SDHA-216ENST00000514027 LOC107984156A0A0G2JMH3 177 aa9.46□□□□□ -0.9
SDHA-216ENST00000514027 IGLV1-40P01703 118 aa9.46□□□□□ -0.9
SDHA-216ENST00000514027 LYRM7Q5U5X0 104 aa9.46□□□□□ -0.9
SDHA-216ENST00000514027 ZFP2Q6ZN57 461 aa9.46□□□□□ -0.9
SDHA-216ENST00000514027 ARL17AQ8IVW1 177 aa9.46□□□□□ -0.9
SDHA-216ENST00000514027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.45□□□□□ -0.94e-6■■■■□ 20.1
SDHA-216ENST00000514027 C14orf178Q8N769 122 aaPredicted RBP9.45□□□□□ -0.9
SDHA-216ENST00000514027 DOPEY1Q5JWR5 2465 aa9.45□□□□□ -0.9
SDHA-216ENST00000514027 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 LINC01549A6NIU2 74 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 GNRH2O43555 120 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 IGHV4-59P01825 116 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 SFTA2Q6UW10 78 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 MYOZ3Q8TDC0 251 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 ATP5LO75964 103 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 C10orf99Q6UWK7 81 aa9.44□□□□□ -0.9
SDHA-216ENST00000514027 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 TCL1BO95988 128 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 DEFB112Q30KQ8 113 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
SDHA-216ENST00000514027 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 SMIM2Q9BVW6 85 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 DPH3P1Q9H4G8 78 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 WIPF1O43516 503 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 CFHR3Q02985 330 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 LINC01587Q99440 93 aa9.43□□□□□ -0.9
SDHA-216ENST00000514027 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
SDHA-216ENST00000514027 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
SDHA-216ENST00000514027 CSPG4Q6UVK1 2322 aa9.42□□□□□ -0.9
SDHA-216ENST00000514027 AGRNO00468 2067 aa9.42□□□□□ -0.9
SDHA-216ENST00000514027 MYO18BQ8IUG5 2567 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms