RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 A0A1W2PPV4 95 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 IGSF23A1L1A6 192 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 TMEM189A5PLL7 270 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 LRCOL1A6NCL2 159 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 SMIM9A6NGZ8 99 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 C17orf112F2Z3M2 114 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 F5H768 121 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 H3BRN7 92 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 SCO1O75880 301 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 HLA-DRB4P13762 266 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 RAB4AP20338 218 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 RPL12P30050 165 aaKnown RBP2.49□□□□□ -2.01
HTT-210ENST00000512909 TSPOP30536 169 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 RNASE4P34096 147 aaKnown RBP2.49□□□□□ -2.01
HTT-210ENST00000512909 PFN2P35080 140 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 CSN1S1P47710 185 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 B2MP61769 119 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 FAM222AQ5U5X8 452 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 SAMD13Q5VXD3 122 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 NTM-AS1Q6ZSK4 140 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 RPP25LQ8N5L8 163 aaKnown RBP2.49□□□□□ -2.01
HTT-210ENST00000512909 OR8A1Q8NGG7 326 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 OR5C1Q8NGR4 320 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 HYLS1Q96M11 299 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 PFDN5Q99471 154 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 MGST2Q99735 147 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 GGACTQ9BVM4 153 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 MED28Q9H204 178 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 WFDC1Q9HC57 220 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 SLC39A9Q9NUM3 307 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 OR5AC2Q9NZP5 309 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 PXMP4Q9Y6I8 212 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 HLA-DRB4X5D2U9 266 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 TGP01266 2768 aa2.49□□□□□ -2.01
HTT-210ENST00000512909 TRRAPQ9Y4A5 3859 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 TRAV8-2A0A0B4J237 113 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 TRAV12-3A0A0B4J271 114 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 A0A0U1RQV1 116 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 FNDC10F2Z333 226 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 H3BQ15 152 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 OR7C2O60412 319 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 MPDU1O75352 247 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 GPX1P07203 203 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 OR10J4P0C629 311 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 NBEAP1P0C6P0 100 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 STAG3L3P0CL85 134 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 PYYP10082 97 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 CXCL3P19876 107 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 RANP62826 216 aaKnown RBP2.48□□□□□ -2.01
HTT-210ENST00000512909 C12orf74Q32Q52 190 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 LCN15Q6UWW0 184 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 MIR17HGQ75NE6 70 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 IQCF2Q8IXL9 164 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 BAP18Q8IXM2 172 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 C1orf158Q8N1D5 194 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 EXOC3-AS1Q8N2X6 119 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 Q8NAQ8 132 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 RMI2Q96E14 147 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 IGF2BP2-AS1Q96M15 143 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 SLC50A1Q9BRV3 221 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 PARD6GQ9BYG4 376 aaPredicted RBP2.48□□□□□ -2.01
HTT-210ENST00000512909 NMES1Q9C002 83 aa2.48□□□□□ -2.01
HTT-210ENST00000512909 C11orf68Q9H3H3 251 aaKnown RBP2.48□□□□□ -2.01
HTT-210ENST00000512909 NOP10Q9NPE3 64 aaKnown RBP2.48□□□□□ -2.01
HTT-210ENST00000512909 LYRM2Q9NU23 88 aaPredicted RBP2.48□□□□□ -2.01
HTT-210ENST00000512909 IGHV3OR16-9A0A0B4J2B5 98 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 A0A0J9YXV3 536 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 PGPA6NDG6 321 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 BOLA2-SMG1P6H3BVE0 249 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 TAAR5O14804 337 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 HMGB3O15347 200 aaKnown RBP2.47□□□□□ -2.01
HTT-210ENST00000512909 MPC2O95563 127 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 PET100P0DJ07 73 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 HIST1H1EP10412 219 aaKnown RBP2.47□□□□□ -2.01
HTT-210ENST00000512909 PRR3P79522 188 aaKnown RBP2.47□□□□□ -2.01
HTT-210ENST00000512909 GUK1Q16774 197 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 ACOT6Q3I5F7 207 aaPredicted RBP2.47□□□□□ -2.01
HTT-210ENST00000512909 GCSAMLQ5JQS6 135 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 TMEM78Q5T7P6 136 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 Q5W150 140 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 LGALS9CQ6DKI2 356 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 LINC00299Q6ZSB3 139 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 CMTM2Q8TAZ6 248 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 RXFP4Q8TDU9 374 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 PPP1R1CQ8WVI7 109 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 MARVELD1Q9BSK0 173 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 TMEM243Q9BU79 118 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 ZNF586Q9NXT0 402 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 APLNQ9ULZ1 77 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 PRELID1Q9Y255 219 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 TIMM8BQ9Y5J9 83 aaPredicted RBP2.47□□□□□ -2.01
HTT-210ENST00000512909 ALG5Q9Y673 324 aa2.47□□□□□ -2.01
HTT-210ENST00000512909 TRBV19A0A075B6N1 114 aa2.46□□□□□ -2.02
HTT-210ENST00000512909 TRGV2A0A075B6R0 118 aa2.46□□□□□ -2.02
HTT-210ENST00000512909 IGKV2-40A0A087WW87 121 aaPredicted RBP2.46□□□□□ -2.02
HTT-210ENST00000512909 FXYD6-FXYD2A0A087WZ82 144 aa2.46□□□□□ -2.02
HTT-210ENST00000512909 TRGV1A0A0A0MS02 117 aa2.46□□□□□ -2.02
HTT-210ENST00000512909 BORCS7-ASMTA0A0B4J1R7 106 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms