RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RS1O15537 224 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 RAB5CP51148 216 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 CRYBA4P53673 196 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 ESRGQ1W209 222 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 LGALS9BQ3B8N2 356 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 CENPWQ5EE01 88 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 NDFIP1Q9BT67 221 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 MANBALQ9NQG1 85 aa4.95□□□□□ -1.62
TOPBP1-207ENST00000509162 TRGV2A0A075B6R0 118 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 IGHV3-73A0A0B4J1V6 119 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 TRAV4A0A0B4J268 109 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 A0A1B0GVY2 172 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 C19orf71A6NCJ1 209 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 FBLL1A6NHQ2 334 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 C9JQL5 133 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 M0R2P5 195 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 NXPH4O95158 308 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 NUDT3O95989 172 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 GATA1P15976 413 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 UBE2G1P62253 170 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 MEF2BQ02080 365 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 OR5I1Q13606 314 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 SAPCD1Q5SSQ6 148 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 DNLZQ5SXM8 178 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 CFAP126Q5VTH2 177 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 C15orf53Q8NAA6 179 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 PARLQ9H300 379 aa4.94□□□□□ -1.62
TOPBP1-207ENST00000509162 B4DEV8 164 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 H3BNG1 76 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 K7EQM0 130 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 M0R2N4 97 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 PRYO14603 147 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 P0DMU3 169 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 FAM231AP0DMU4 169 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 FAM231CP0DMU5 169 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 GZMBP10144 247 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 FAM162BQ5T6X4 162 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 BAGE2Q86Y30 109 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 OR10AG1Q8NH19 301 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 PTH2Q96A98 100 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 KCNS1Q96KK3 526 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 SPXQ9BT56 116 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 NKX6-2Q9C056 277 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 IL36BQ9NZH7 164 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 ZFP30Q9Y2G7 519 aa4.93□□□□□ -1.62
TOPBP1-207ENST00000509162 MUC21A0A0G2JKD1 596 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 MUC21A0A140T8X8 626 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 FABP5P3A8MUU1 101 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 C9JCJ5 164 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 K7EQD1 137 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 SNAI2O43623 268 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 IGLC6P0CF74 106 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 ASIPP42127 132 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 PPT1P50897 306 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 PRR27Q6MZM9 219 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 C14orf178Q8N769 122 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 UPK3BQ9BT76 320 aa4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 MRPS16Q9Y3D3 137 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-207ENST00000509162 RBFOX3A6NFN3 312 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 ORM1P02763 201 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 CRYGDP07320 174 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 CXCL1P09341 107 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 RNF212Q495C1 297 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 EIF5AL1Q6IS14 154 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 WFDC10BQ8IUB3 73 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 SLC25A29Q8N8R3 303 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 PRO0255Q9UI72 69 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 VAX2Q9UIW0 290 aa4.91□□□□□ -1.62
TOPBP1-207ENST00000509162 NBDYA0A0U1RRE5 68 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 SRP19P09132 144 aaKnown RBP4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 LINC00315P59091 139 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 UBE2DNLQ8IWF7 75 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 OR4C5Q8NGB2 326 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 FAM210AQ96ND0 272 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 HHLA3Q9XRX5 114 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 ICOSQ9Y6W8 199 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 KIF25-AS1Q9Y6Z4 181 aa4.9□□□□□ -1.63
TOPBP1-207ENST00000509162 TRGV4A0A0C4DH28 118 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 M0R381 172 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 PDE6DO43924 150 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 IFNA1P01562 189 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 IFITM2Q01629 132 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 TEX261Q6UWH6 196 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 LYPD5Q6UWN5 251 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 GTSF1Q8WW33 167 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 SFRP2Q96HF1 295 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 TXNDC17Q9BRA2 123 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 RNASE7Q9H1E1 156 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 MED9Q9NWA0 146 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
TOPBP1-207ENST00000509162 S100A9P06702 114 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 NPSP0C0P6 89 aa4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 MGST1P10620 155 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 CTRLP40313 264 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms