RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 LTAP01374 205 aa9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 FUSP35637 526 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 ZNF345Q14585 488 aa9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 DMRTA1Q5VZB9 504 aa9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 CST9LP1Q5W188 147 aa9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 ZC2HC1AQ96GY0 325 aa9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 SFRP2Q96HF1 295 aa9.08□□□□□ -0.96
CCHCR1-227ENST00000508852 AKR1C3P42330 323 aa9.07□□□□□ -0.96
CCHCR1-227ENST00000508852 EIF5AP63241 154 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-227ENST00000508852 RPL36AP83881 106 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-227ENST00000508852 Q6ZSN1 163 aa9.07□□□□□ -0.96
CCHCR1-227ENST00000508852 RPL36ALQ969Q0 106 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-227ENST00000508852 M0R036 132 aa9.06□□□□□ -0.96
CCHCR1-227ENST00000508852 PFDN1O60925 122 aa9.06□□□□□ -0.96
CCHCR1-227ENST00000508852 CXCL1P09341 107 aa9.06□□□□□ -0.96
CCHCR1-227ENST00000508852 CRIP1P50238 77 aa9.06□□□□□ -0.96
CCHCR1-227ENST00000508852 FAM74A4Q5TZK3 123 aa9.06□□□□□ -0.96
CCHCR1-227ENST00000508852 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
CCHCR1-227ENST00000508852 A0A087WX48 190 aa9.05□□□□□ -0.96
CCHCR1-227ENST00000508852 A0A0D9SG52 128 aa9.05□□□□□ -0.96
CCHCR1-227ENST00000508852 PKIAP61925 76 aa9.05□□□□□ -0.96
CCHCR1-227ENST00000508852 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
CCHCR1-227ENST00000508852 Q8N976 141 aa9.05□□□□□ -0.96
CCHCR1-227ENST00000508852 SAMD10Q9BYL1 202 aa9.05□□□□□ -0.96
CCHCR1-227ENST00000508852 TRBV7-3A0A075B6L6 115 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 GRIFINA4D1Z8 144 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 HMSDA8MTL9 139 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 M0R381 172 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 RAB4BP61018 213 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 Q0VG73 95 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 NIT1Q86X76 327 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 KCNRGQ8N5I3 272 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 SFT2D1Q8WV19 159 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 MBD3L1Q8WWY6 194 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 JPT2Q9H910 190 aa9.04□□□□□ -0.96
CCHCR1-227ENST00000508852 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
CCHCR1-227ENST00000508852 KANTRA0A1W2PQU2 76 aa9.03□□□□□ -0.96
CCHCR1-227ENST00000508852 G3V3Q6 166 aa9.03□□□□□ -0.96
CCHCR1-227ENST00000508852 PAGE4O60829 102 aa9.03□□□□□ -0.96
CCHCR1-227ENST00000508852 TMEM97Q5BJF2 176 aa9.03□□□□□ -0.96
CCHCR1-227ENST00000508852 DAZ4Q86SG3 579 aaKnown RBP9.03□□□□□ -0.96
CCHCR1-227ENST00000508852 DAZ3Q9NR90 486 aaKnown RBP9.03□□□□□ -0.96
CCHCR1-227ENST00000508852 A0A087WWL8 130 aa9.02□□□□□ -0.97
CCHCR1-227ENST00000508852 OR10G8Q8NGN5 311 aa9.02□□□□□ -0.97
CCHCR1-227ENST00000508852 ZNF471Q9BX82 626 aaPredicted RBP9.02□□□□□ -0.97
CCHCR1-227ENST00000508852 DMBT1Q9UGM3 2413 aaPredicted RBP9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 TMSB15BA0A087X1C1 80 aa9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 SMR3BP02814 79 aaPredicted RBP9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 UBE2D3P61077 147 aa9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 UBE2D2P62837 147 aa9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 BAGE2Q86Y30 109 aa9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 FAM213BQ8TBF2 198 aa9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 FAT1Q14517 4588 aa9.01□□□□□ -0.97
CCHCR1-227ENST00000508852 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
CCHCR1-227ENST00000508852 TEX46H3BTG2 121 aa9□□□□□ -0.97
CCHCR1-227ENST00000508852 H2AFB1P0C5Y9 115 aa9□□□□□ -0.97
CCHCR1-227ENST00000508852 OR5AL1P0C617 328 aa9□□□□□ -0.97
CCHCR1-227ENST00000508852 MLST8Q9BVC4 326 aa9□□□□□ -0.97
CCHCR1-227ENST00000508852 MANBALQ9NQG1 85 aa9□□□□□ -0.97
CCHCR1-227ENST00000508852 KLK12Q9UKR0 248 aa9□□□□□ -0.97
CCHCR1-227ENST00000508852 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
CCHCR1-227ENST00000508852 BCL2L11O43521 198 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 SMIM17P0DL12 118 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 RAB5CP51148 216 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 ZNF56Q15929 161 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 EIF5AL1Q6IS14 154 aaKnown RBP8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 ATRAIDQ6UW56 229 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 Q6ZSA8 131 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 Q9UF83 564 aa8.99□□□□□ -0.97
CCHCR1-227ENST00000508852 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 RBFOX3A6NFN3 312 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 TMEM262E9PQX1 116 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 SNAI2O43623 268 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 CRPP02741 224 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 TMUB2Q71RG4 321 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 BAALCQ8WXS3 180 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 UBE2WQ96B02 151 aa8.98□□□□□ -0.97
CCHCR1-227ENST00000508852 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
CCHCR1-227ENST00000508852 RPS20P60866 119 aaKnown RBP8.97□□□□□ -0.97
CCHCR1-227ENST00000508852 PRR27Q6MZM9 219 aa8.97□□□□□ -0.97
CCHCR1-227ENST00000508852 Q8N3U1 123 aa8.97□□□□□ -0.97
CCHCR1-227ENST00000508852 SMIM12Q96EX1 92 aa8.97□□□□□ -0.97
CCHCR1-227ENST00000508852 C1orf43Q9BWL3 253 aa8.97□□□□□ -0.97
CCHCR1-227ENST00000508852 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
CCHCR1-227ENST00000508852 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 XKRY2A2RUG3 117 aa8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 F5H697 171 aa8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 H7C1H1 209 aa8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 LECT2O14960 151 aa8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 OR10AG1Q8NH19 301 aa8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 DAZAP1Q96EP5 407 aaKnown RBP8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 AP1S3Q96PC3 154 aa8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 BIN3Q9NQY0 253 aa8.96□□□□□ -0.98
CCHCR1-227ENST00000508852 FAM30AQ9NZY2 134 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms