RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 Q6AWC8 147 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 A2ML1A8K2U0 1454 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 PTPRMP28827 1452 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 MYOM2P54296 1465 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 CITO14578 2027 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 SPAG17Q6Q759 2223 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 KTN1Q86UP2 1357 aaKnown RBP1.47□□□□□ -2.17
DHFR-204ENST00000508282 DLG5Q8TDM6 1919 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 ZNF142P52746 1687 aaPredicted RBP1.46□□□□□ -2.18
DHFR-204ENST00000508282 PIGBOS1A0A0B4J2F0 54 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 APOC4-APOC2K7ER74 178 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 APOC2P02655 101 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 C12orf73Q69YU5 71 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 C12orf57Q99622 126 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 RPRMQ9NS64 109 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 DLEC1Q9Y238 1755 aa1.46□□□□□ -2.18
DHFR-204ENST00000508282 PRRC2BQ5JSZ5 2229 aaKnown RBP1.46□□□□□ -2.18
DHFR-204ENST00000508282 MUC22E2RYF6 1773 aaPredicted RBP1.45□□□□□ -2.18
DHFR-204ENST00000508282 TCRBV3S1A0A5B6 114 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 C20orf202A1L168 122 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 ATP6V1G2-DDX39BF2Z307 99 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 NCR3O14931 201 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 UBE2G1P62253 170 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 PPP3R1P63098 170 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 C9orf116Q5BN46 136 aaPredicted RBP1.45□□□□□ -2.18
DHFR-204ENST00000508282 S100A7L2Q5SY68 101 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 LSM10Q969L4 123 aaKnown RBP1.45□□□□□ -2.18
DHFR-204ENST00000508282 IFI27L1Q96BM0 104 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 AMELYQ99218 206 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 TECTAO75443 2155 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 RREB1Q92766 1687 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 QRICH2Q9H0J4 1663 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 AFDNP55196 1824 aaKnown RBP1.45□□□□□ -2.18
DHFR-204ENST00000508282 SPTBP11277 2137 aa1.45□□□□□ -2.18
DHFR-204ENST00000508282 TEX49A0A1B0GTD5 131 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 LOC101927531A0A1B0GV80 90 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 TNFP01375 233 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 IFNA17P01571 189 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 LYNX1P0DP58 116 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 CBLN1P23435 193 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 XAF1Q6GPH4 301 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 MRPL54Q6P161 138 aaKnown RBP1.44□□□□□ -2.18
DHFR-204ENST00000508282 Q6ZS92 163 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 CYP2G1PQ6ZSU1 146 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 TSKUQ8WUA8 353 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 SPANXDQ9BXN6 97 aa1.44□□□□□ -2.18
DHFR-204ENST00000508282 NCOA6Q14686 2063 aaPredicted RBP1.44□□□□□ -2.18
DHFR-204ENST00000508282 KIAA0100Q14667 2235 aaKnown RBP1.43□□□□□ -2.18
DHFR-204ENST00000508282 ASCC3Q8N3C0 2202 aaKnown RBP1.43□□□□□ -2.18
DHFR-204ENST00000508282 TRAV12-3A0A0B4J271 114 aa1.43□□□□□ -2.18
DHFR-204ENST00000508282 CATR1Q13166 79 aa1.43□□□□□ -2.18
DHFR-204ENST00000508282 Q6ZQY7 126 aa1.43□□□□□ -2.18
DHFR-204ENST00000508282 DEFB132Q7Z7B7 95 aa1.43□□□□□ -2.18
DHFR-204ENST00000508282 RBBP6Q7Z6E9 1792 aaKnown RBP1.42□□□□□ -2.18
DHFR-204ENST00000508282 ANGP03950 147 aaKnown RBP1.42□□□□□ -2.18
DHFR-204ENST00000508282 FXYD3Q14802 87 aa1.42□□□□□ -2.18
DHFR-204ENST00000508282 C9orf153Q5TBE3 101 aa1.42□□□□□ -2.18
DHFR-204ENST00000508282 Q6ZSA8 131 aa1.42□□□□□ -2.18
DHFR-204ENST00000508282 IER3IP1Q9Y5U9 82 aa1.42□□□□□ -2.18
DHFR-204ENST00000508282 NWD2Q9ULI1 1742 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 TRBV10-3A0A0K0K1G6 114 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 NBDYA0A0U1RRE5 68 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 NPC2P61916 151 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 GTF2H5Q6ZYL4 71 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 Q86TA4 180 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 SPTSSBQ8NFR3 76 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 C14orf144Q96I85 54 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 PPP3R2Q96LZ3 170 aa1.41□□□□□ -2.18
DHFR-204ENST00000508282 BLMP54132 1417 aaPredicted RBP1.4□□□□□ -2.18
DHFR-204ENST00000508282 KDM6BO15054 1643 aa1.4□□□□□ -2.18
DHFR-204ENST00000508282 PARP14Q460N5 1801 aa1.4□□□□□ -2.18
DHFR-204ENST00000508282 RP1L1Q8IWN7 2480 aaPredicted RBP1.4□□□□□ -2.19
DHFR-204ENST00000508282 NRKQ7Z2Y5 1582 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 PZPP20742 1482 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 IFT140Q96RY7 1462 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 FXYD1O00168 92 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 EFNA4P52798 201 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 CAV3P56539 151 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 RBM3P98179 157 aaKnown RBP1.4□□□□□ -2.19
DHFR-204ENST00000508282 C8orf59Q8N0T1 100 aaPredicted RBP1.4□□□□□ -2.19
DHFR-204ENST00000508282 SVBPQ8N300 66 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 C5orf56Q8N8D9 126 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 Q8N8P6 123 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 PPP1R1CQ8WVI7 109 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 C10orf82Q8WW14 230 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 CCL19Q99731 98 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 ESPL1Q14674 2120 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 MAPKBP1O60336 1514 aa1.4□□□□□ -2.19
DHFR-204ENST00000508282 FLG2Q5D862 2391 aaPredicted RBP1.4□□□□□ -2.19
DHFR-204ENST00000508282 TRBV30A0A0K0K1B3 111 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 SMIM6P0DI80 62 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 RBP2P50120 134 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 INSL4Q14641 139 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 LINC00208Q96KT6 92 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 COA4Q9NYJ1 87 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 NRXN2Q9P2S2 1712 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 PLXNA1Q9UIW2 1896 aa1.39□□□□□ -2.19
DHFR-204ENST00000508282 ABCA4P78363 2273 aa1.38□□□□□ -2.19
DHFR-204ENST00000508282 OOSP1A8MZH6 123 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms