RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 Q8N8P6 123 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 GDPD1Q8N9F7 314 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 TET1Q8NFU7 2136 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 OR4B1Q8NGF8 309 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 OR2T35Q8NGX2 323 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 OR5AK2Q8NH90 309 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 PFN4Q8NHR9 129 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 OTOSQ8NHW6 89 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 MCFD2Q8NI22 146 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 Q8TAT8 98 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 LCN9Q8WX39 176 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 CLEC2BQ92478 149 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 HIST1H2BHQ93079 126 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 HIST1H2BNQ99877 126 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 HIST1H2BMQ99879 126 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 HIST1H2BLQ99880 126 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 PMCHL2Q9BQD1 86 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 LXNQ9BS40 222 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 FAM103A1Q9BTL3 118 aaKnown RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 RTL8AQ9BWD3 113 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 PBOV1Q9GZY1 135 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 TMEM126AQ9H061 195 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 AGPAT4-IT1Q9H0P7 198 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 TMEM133Q9H2Q1 129 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 DPH3P1Q9H4G8 78 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 EFCAB1Q9HAE3 211 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 LYRM2Q9NU23 88 aaPredicted RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 RSL24D1Q9UHA3 163 aaKnown RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 AK3Q9UIJ7 227 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 HLA-DRB4X5D2U9 266 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 GLI2P10070 1586 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 UBR3Q6ZT12 1888 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 TARBP1Q13395 1621 aaKnown RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 MYO7AQ13402 2215 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 MROH2AA6NES4 1674 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 COL4A6Q14031 1691 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 ANKRD36BQ8N2N9 1353 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 MED23Q9ULK4 1368 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 COL24A1Q17RW2 1714 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 KNDC1Q76NI1 1749 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 FMN2Q9NZ56 1722 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 KDM6AO15550 1401 aaPredicted RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 DCCP43146 1447 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 CPSF1Q10570 1443 aaKnown RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 CEP162Q5TB80 1403 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 PPIP5K1Q6PFW1 1433 aa0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 PRG4Q92954 1404 aaPredicted RBP0.3□□□□□ -2.36
CDC42SE2-210ENST00000506929 RGPD2P0DJD1 1756 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 UBR2Q8IWV8 1755 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 COL1A1P02452 1464 aaPredicted RBP0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 IFT140Q96RY7 1462 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 NLRP1Q9C000 1473 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 MRC2Q9UBG0 1479 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 TSC2P49815 1807 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 MAP3K1Q13233 1512 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 TTC37Q6PGP7 1564 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 THOC2Q8NI27 1593 aaKnown RBP0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 SCRIBQ14160 1630 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 A0A087WVE0 104 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 IGHV1-58A0A0C4DH39 117 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 TRBV7-6A0A0J9YX20 115 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 A0A1B0GV50 99 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 A0A1B0GX51 115 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 NAP1L6A6NFF2 107 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 BBIP1A8MTZ0 92 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 MCRIP1C9JLW8 97 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 M0R3E3 92 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 RER1O15258 196 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 YPEL1O60688 119 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 HYPMO75409 117 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 DPM2O94777 84 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 NDUFC2O95298 119 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 SFT2D2O95562 160 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 CYB5AP00167 134 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 TNFP01375 233 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 TRACP01848 142 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 HBDP02042 147 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 PRM2P04554 102 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 TSPAN19P0C672 248 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 ASAH2BP0C7U1 165 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 PIRTP0C851 137 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 IGLC2P0DOY2 106 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 IGLC3P0DOY3 106 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 PYYP10082 97 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 MGST1P10620 155 aaKnown RBP0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 IFITM1P13164 125 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 SDC2P34741 201 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 RPL22P35268 128 aaKnown RBP0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 GNG4P50150 75 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 DSCR4P56555 118 aaPredicted RBP0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 TPPP2P59282 170 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 YPEL3P61236 119 aaPredicted RBP0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 PCBD1P61457 104 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 RPS28P62857 69 aaKnown RBP0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 DYNLT1P63172 113 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 SELENOWP63302 87 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 PLGLB1Q02325 96 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 KLRD1Q13241 179 aa0.29□□□□□ -2.36
CDC42SE2-210ENST00000506929 IAH1Q2TAA2 248 aaPredicted RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms