RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 MBD3L3A6NE82 208 aaPredicted RBP10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 MBD3L5A6NJ08 208 aaPredicted RBP10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 H7C423 109 aa10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 RPL13AP40429 203 aaKnown RBP10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 HES1Q14469 280 aa10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 MBD3L2Q8NHZ7 208 aaPredicted RBP10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 NRGNQ92686 78 aa10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 FAM215AQ9Y5M1 114 aa10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 CLEC2BQ92478 149 aa10.73□□□□□ -0.69
COL6A4P2-202ENST00000504443 DEFB1P60022 68 aa10.72□□□□□ -0.69
COL6A4P2-202ENST00000504443 NDPQ00604 133 aa10.72□□□□□ -0.69
COL6A4P2-202ENST00000504443 NPC2P61916 151 aa10.72□□□□□ -0.69
COL6A4P2-202ENST00000504443 C9orf153Q5TBE3 101 aa10.72□□□□□ -0.69
COL6A4P2-202ENST00000504443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.72□□□□□ -0.69
COL6A4P2-202ENST00000504443 LYNX1G3V0Z9 82 aa10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 P0DMU3 169 aa10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 LYNX1P0DP58 116 aa10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 S100A4P26447 101 aaKnown RBP10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 COL6A6A6NMZ7 2263 aa10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 PMVKQ15126 192 aa10.71□□□□□ -0.69
COL6A4P2-202ENST00000504443 ABCA4P78363 2273 aa10.71□□□□□ -0.7
COL6A4P2-202ENST00000504443 PRSS2P07478 247 aa10.71□□□□□ -0.7
COL6A4P2-202ENST00000504443 EEF1AKMT3Q96AZ1 226 aa10.71□□□□□ -0.7
COL6A4P2-202ENST00000504443 IGIPA6NJ69 53 aa10.7□□□□□ -0.7
COL6A4P2-202ENST00000504443 NBR2O15453 112 aa10.7□□□□□ -0.7
COL6A4P2-202ENST00000504443 CD3EP07766 207 aa10.7□□□□□ -0.7
COL6A4P2-202ENST00000504443 UBE2E1P51965 193 aa10.7□□□□□ -0.7
COL6A4P2-202ENST00000504443 DEFB109BQ30KR1 87 aa10.7□□□□□ -0.7
COL6A4P2-202ENST00000504443 IGHV4-4A0A075B6R2 117 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 GPHB5Q86YW7 130 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 PHLDA3Q9Y5J5 127 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 RBAKDNA6NC62 111 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 HERVK_113P63121 156 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 BSPH1Q075Z2 132 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 JPT2Q9H910 190 aa10.69□□□□□ -0.7
COL6A4P2-202ENST00000504443 GNRH2O43555 120 aa10.68□□□□□ -0.7
COL6A4P2-202ENST00000504443 NUP37Q8NFH4 326 aa10.68□□□□□ -0.7
COL6A4P2-202ENST00000504443 DNAJC30Q96LL9 226 aa10.68□□□□□ -0.7
COL6A4P2-202ENST00000504443 TRAV17A0A0B4J275 112 aa10.68□□□□□ -0.7
COL6A4P2-202ENST00000504443 A0A0B4J2C4 111 aa10.68□□□□□ -0.7
COL6A4P2-202ENST00000504443 NPFFO15130 113 aa10.68□□□□□ -0.7
COL6A4P2-202ENST00000504443 FAM19A5Q7Z5A7 132 aaPredicted RBP10.68□□□□□ -0.7
COL6A4P2-202ENST00000504443 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
COL6A4P2-202ENST00000504443 C5orf47Q569G3 176 aa10.67□□□□□ -0.7
COL6A4P2-202ENST00000504443 BUB3O43684 328 aa10.67□□□□□ -0.7
COL6A4P2-202ENST00000504443 NDUFA7O95182 113 aa10.67□□□□□ -0.7
COL6A4P2-202ENST00000504443 EDA2RQ9HAV5 297 aa10.67□□□□□ -0.7
COL6A4P2-202ENST00000504443 KAAG1Q9UBP8 84 aa10.67□□□□□ -0.7
COL6A4P2-202ENST00000504443 MED13LQ71F56 2210 aa10.67□□□□□ -0.7
COL6A4P2-202ENST00000504443 SPTAN1Q13813 2472 aaKnown RBP10.66□□□□□ -0.7
COL6A4P2-202ENST00000504443 TRAV8-3A0A0A6YYJ7 113 aa10.66□□□□□ -0.7
COL6A4P2-202ENST00000504443 SMIM9A6NGZ8 99 aa10.66□□□□□ -0.7
COL6A4P2-202ENST00000504443 M0R2P5 195 aa10.66□□□□□ -0.7
COL6A4P2-202ENST00000504443 EBI3Q14213 229 aa10.66□□□□□ -0.7
COL6A4P2-202ENST00000504443 POM121L12Q8N7R1 296 aa10.66□□□□□ -0.7
COL6A4P2-202ENST00000504443 SPANXA1Q9NS26 97 aa10.66□□□□□ -0.7
COL6A4P2-202ENST00000504443 PAPPA-AS1Q5QFB9 102 aa10.65□□□□□ -0.7
COL6A4P2-202ENST00000504443 TMEM101Q96IK0 257 aa10.65□□□□□ -0.7
COL6A4P2-202ENST00000504443 LINC00527Q9UJ94 153 aa10.65□□□□□ -0.7
COL6A4P2-202ENST00000504443 CLPSL1A2RUU4 121 aa10.65□□□□□ -0.7
COL6A4P2-202ENST00000504443 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
COL6A4P2-202ENST00000504443 A0A087WWL8 130 aa10.65□□□□□ -0.71
COL6A4P2-202ENST00000504443 TRAV41A0A0B4J266 112 aa10.65□□□□□ -0.71
COL6A4P2-202ENST00000504443 TRBV30A0A0K0K1B3 111 aa10.65□□□□□ -0.71
COL6A4P2-202ENST00000504443 TRBV7-7A0A0K0K1E9 115 aa10.65□□□□□ -0.71
COL6A4P2-202ENST00000504443 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.71
COL6A4P2-202ENST00000504443 RNASE6Q93091 150 aaKnown RBP10.65□□□□□ -0.71
COL6A4P2-202ENST00000504443 ZNF256Q9Y2P7 627 aaPredicted RBP10.65□□□□□ -0.71
COL6A4P2-202ENST00000504443 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
COL6A4P2-202ENST00000504443 ZNF876PQ49A33 203 aa10.64□□□□□ -0.71
COL6A4P2-202ENST00000504443 SMCR5Q8TEV8 140 aa10.64□□□□□ -0.71
COL6A4P2-202ENST00000504443 METTL26Q96S19 204 aa10.64□□□□□ -0.71
COL6A4P2-202ENST00000504443 UBTD1Q9HAC8 227 aa10.64□□□□□ -0.71
COL6A4P2-202ENST00000504443 F5H697 171 aa10.64□□□□□ -0.71
COL6A4P2-202ENST00000504443 DUX5Q96PT3 197 aa10.64□□□□□ -0.71
COL6A4P2-202ENST00000504443 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.63□□□□□ -0.71
COL6A4P2-202ENST00000504443 RNF5Q99942 180 aa10.63□□□□□ -0.71
COL6A4P2-202ENST00000504443 DYNLRB1Q9NP97 96 aa10.63□□□□□ -0.71
COL6A4P2-202ENST00000504443 ADAMTSL4-AS1Q5T5F5 129 aa10.63□□□□□ -0.71
COL6A4P2-202ENST00000504443 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
COL6A4P2-202ENST00000504443 A0A0J9YXV3 536 aa10.62□□□□□ -0.71
COL6A4P2-202ENST00000504443 A0A0J9YXY3 114 aa10.62□□□□□ -0.71
COL6A4P2-202ENST00000504443 RNASE4P34096 147 aaKnown RBP10.62□□□□□ -0.71
COL6A4P2-202ENST00000504443 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
COL6A4P2-202ENST00000504443 LEPROTO15243 131 aa10.62□□□□□ -0.71
COL6A4P2-202ENST00000504443 C15orf32Q32M92 178 aa10.62□□□□□ -0.71
COL6A4P2-202ENST00000504443 SPXQ9BT56 116 aa10.62□□□□□ -0.71
COL6A4P2-202ENST00000504443 TRAV12-3A0A0B4J271 114 aa10.61□□□□□ -0.71
COL6A4P2-202ENST00000504443 IGFL2Q6UWQ7 119 aa10.61□□□□□ -0.71
COL6A4P2-202ENST00000504443 CLEC19AQ6UXS0 136 aa10.61□□□□□ -0.71
COL6A4P2-202ENST00000504443 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
COL6A4P2-202ENST00000504443 ITPR1Q14643 2758 aa10.61□□□□□ -0.71
COL6A4P2-202ENST00000504443 A8MZ25 164 aa10.61□□□□□ -0.71
COL6A4P2-202ENST00000504443 NPBQ8NG41 125 aa10.61□□□□□ -0.71
COL6A4P2-202ENST00000504443 C9orf47Q6ZRZ4 202 aa10.6□□□□□ -0.71
COL6A4P2-202ENST00000504443 ZFYVE26Q68DK2 2539 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms