RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 HELZP42694 1942 aaKnown RBP0.84□□□□□ -2.27
SUB1-204ENST00000504016 A0A1W2PPM0 123 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 RBAKDNA6NC62 111 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 LINC00587B1AMM8 73 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 PPP3R1P63098 170 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 SSBP1Q04837 148 aaKnown RBP0.84□□□□□ -2.27
SUB1-204ENST00000504016 SPINK13Q1W4C9 94 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 Q6AWC8 147 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 SVBPQ8N300 66 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 TSKUQ8WUA8 353 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 TNRC6AQ8NDV7 1962 aaKnown RBP0.84□□□□□ -2.28
SUB1-204ENST00000504016 CACNA1BQ00975 2339 aa0.84□□□□□ -2.28
SUB1-204ENST00000504016 ZNF518AQ6AHZ1 1483 aa0.84□□□□□ -2.28
SUB1-204ENST00000504016 KIAA0100Q14667 2235 aaKnown RBP0.84□□□□□ -2.28
SUB1-204ENST00000504016 TET1Q8NFU7 2136 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 KIDINS220Q9ULH0 1771 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 KIAA1549LQ6ZVL6 1849 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 TRAV12-3A0A0B4J271 114 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 TRBV10-3A0A0K0K1G6 114 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 FAM24AA6NFZ4 105 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 SMIM6P0DI80 62 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 NPC2P61916 151 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 KLKP1Q107X0 134 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 ZNF56Q15929 161 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 MRPL54Q6P161 138 aaKnown RBP0.83□□□□□ -2.28
SUB1-204ENST00000504016 C10orf99Q6UWK7 81 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 ZNF818PQ6ZRF7 136 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 SBSPONQ8IVN8 264 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 IFI27L1Q96BM0 104 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 AQP10Q96PS8 301 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 COL6A6A6NMZ7 2263 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 PEG3Q9GZU2 1588 aa0.83□□□□□ -2.28
SUB1-204ENST00000504016 WDR97A6NE52 1622 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 KDM6BO15054 1643 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 ZGRF1Q86YA3 2104 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 BCL9LQ86UU0 1499 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 LOC101927531A0A1B0GV80 90 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 SSSCA1O60232 199 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 PITX3O75364 302 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 UBE2G1P62253 170 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 CCL8P80075 99 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 FXYD3Q14802 87 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 CCL19Q99731 98 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 SCP2D1Q9UJQ7 156 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 ADGRB1O14514 1584 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 SIP14410 1827 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 PLXNA4Q9HCM2 1894 aa0.82□□□□□ -2.28
SUB1-204ENST00000504016 ALPK3Q96L96 1907 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 MYH13Q9UKX3 1938 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.81□□□□□ -2.28
SUB1-204ENST00000504016 IFT140Q96RY7 1462 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 TNRC6BQ9UPQ9 1833 aaKnown RBP0.81□□□□□ -2.28
SUB1-204ENST00000504016 TRBV7-1A0A0A6YYK4 115 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 FXYD1O00168 92 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 EFNA4P52798 201 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 ATP5EP56381 51 aaPredicted RBP0.81□□□□□ -2.28
SUB1-204ENST00000504016 CATR1Q13166 79 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 Q86TA4 180 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 SPTSSBQ8NFR3 76 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 DSCR8Q96T75 97 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 TMEM14BQ9NUH8 114 aa0.81□□□□□ -2.28
SUB1-204ENST00000504016 BLMP54132 1417 aaPredicted RBP0.81□□□□□ -2.28
SUB1-204ENST00000504016 SPTBP11277 2137 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 CDK12Q9NYV4 1490 aaPredicted RBP0.8□□□□□ -2.28
SUB1-204ENST00000504016 ANK1P16157 1881 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 MYH9P35579 1960 aaKnown RBP0.8□□□□□ -2.28
SUB1-204ENST00000504016 TRAV13-2A0A0B4J235 113 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 SIX6O95475 246 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 PRB4P10163 310 aaPredicted RBP0.8□□□□□ -2.28
SUB1-204ENST00000504016 IFITM1P13164 125 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 DCDP81605 110 aaKnown RBP0.8□□□□□ -2.28
SUB1-204ENST00000504016 C9orf153Q5TBE3 101 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 C5orf56Q8N8D9 126 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 MYOZ3Q8TDC0 251 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 COX7B2Q8TF08 81 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 C12orf57Q99622 126 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 CYP4F30PQ9H0H9 118 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 V9GYV3 84 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 RIMS1Q86UR5 1692 aaKnown RBP0.8□□□□□ -2.28
SUB1-204ENST00000504016 A2ML1A8K2U0 1454 aa0.8□□□□□ -2.28
SUB1-204ENST00000504016 MYH6P13533 1939 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 MAPKBP1O60336 1514 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 NCOA6Q14686 2063 aaPredicted RBP0.79□□□□□ -2.28
SUB1-204ENST00000504016 UBE2L5PA0A1B0GUS4 154 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 LOC100130705A0A1B0GUX0 176 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 TMEM218A2RU14 115 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 ATP6V1G2-DDX39BF2Z307 99 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 H3BQ15 152 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 CCL3L1P16619 93 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 RBP2P50120 134 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 UBE2L3P68036 154 aaKnown RBP0.79□□□□□ -2.28
SUB1-204ENST00000504016 S100A7L2Q5SY68 101 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 C5orf38Q86SI9 138 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 C20orf197Q8N268 126 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 ACBD7Q8N6N7 88 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 LINC00208Q96KT6 92 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 PTPRDP23468 1912 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 MBD5Q9P267 1494 aa0.79□□□□□ -2.28
SUB1-204ENST00000504016 LRP5O75197 1615 aa0.78□□□□□ -2.28
SUB1-204ENST00000504016 NALCNQ8IZF0 1738 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms