RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 HAMPP81172 84 aa12.47□□□□□ -0.41
HMGXB3-202ENST00000503427 NRGNQ92686 78 aa12.47□□□□□ -0.41
HMGXB3-202ENST00000503427 FSTL3O95633 263 aa12.46□□□□□ -0.41
HMGXB3-202ENST00000503427 CGB3P0DN86 165 aa12.46□□□□□ -0.41
HMGXB3-202ENST00000503427 CGB7P0DN87 165 aa12.46□□□□□ -0.41
HMGXB3-202ENST00000503427 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.41
HMGXB3-202ENST00000503427 MED14OSP0DP75 135 aa12.46□□□□□ -0.41
HMGXB3-202ENST00000503427 TEX48A0A1B0GUV7 120 aa12.46□□□□□ -0.42
HMGXB3-202ENST00000503427 DSCR8Q96T75 97 aa12.46□□□□□ -0.42
HMGXB3-202ENST00000503427 CHD3Q12873 2000 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 IGHG2P01859 326 aa12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 SONP18583 2426 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 A0A0J9YXV3 536 aa12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 DEFB136Q30KP8 78 aa12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 K7EMT4 169 aa12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-202ENST00000503427 Q6ZPA2 131 aa12.44□□□□□ -0.42
HMGXB3-202ENST00000503427 FXYD2P54710 66 aa12.44□□□□□ -0.42
HMGXB3-202ENST00000503427 SH2D6Q7Z4S9 175 aa12.44□□□□□ -0.42
HMGXB3-202ENST00000503427 CEP192Q8TEP8 1941 aa12.44□□□□□ -0.42
HMGXB3-202ENST00000503427 TAX1BP3O14907 124 aa12.44□□□□□ -0.42
HMGXB3-202ENST00000503427 TOMM6Q96B49 74 aa12.44□□□□□ -0.42
HMGXB3-202ENST00000503427 BAALC-AS2P0C853 105 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 SLURP1P55000 103 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 CRIP3Q6Q6R5 217 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 TMEM126AQ9H061 195 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 IGKV1D-37A0A075B6S9 117 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 A0A096LPF7 62 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 A4D1N5 150 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 ACYP1P07311 99 aa12.43□□□□□ -0.42
HMGXB3-202ENST00000503427 PROP1O75360 226 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 MUSTN1Q8IVN3 82 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 DYSFO75923 2080 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 XCL1P47992 114 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 LMO4P61968 165 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 ATRXP46100 2492 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 HIVEP2P31629 2446 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 E9PLD3 99 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 C9orf66Q5T8R8 295 aa12.42□□□□□ -0.42
HMGXB3-202ENST00000503427 CSPG4Q6UVK1 2322 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 A0A1B0GXF2 115 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 LOXL1Q08397 574 aaPredicted RBP12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 GPHB5Q86YW7 130 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 APRG1Q8IVJ8 170 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 BAALCQ8WXS3 180 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 PCNX3Q9H6A9 2034 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 MED12LQ86YW9 2145 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 TINCRA0A1B0GVN0 87 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 CLPSL2Q6UWE3 100 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 TNRC6AQ8NDV7 1962 aaKnown RBP12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 CRYBA4P53673 196 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 TTTY13Q9BZ97 58 aa12.41□□□□□ -0.42
HMGXB3-202ENST00000503427 TRAV25A0A0B4J276 109 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 ODF1Q14990 250 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 DAZ4Q86SG3 579 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 Q8N1Y9 231 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 DAZ3Q9NR90 486 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 ORMDL1Q9P0S3 153 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 C2orf70A6NJV1 201 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 SPATA12Q7Z6I5 190 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 RMI2Q96E14 147 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 NUP210LQ5VU65 1888 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 ODF3BA8MYP8 253 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 K7EQD1 137 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 IGLV2-8P01709 118 aa12.4□□□□□ -0.42
HMGXB3-202ENST00000503427 LRRC75A-AS1Q8N1F1 130 aa12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 C16orf74Q96GX8 76 aa12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 A6NDX4 124 aa12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 TNFRSF13BO14836 293 aaPredicted RBP12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 TRACP01848 142 aa12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 RPL39P62891 51 aaKnown RBP12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 TEN1Q86WV5 123 aa12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 ICOSQ9Y6W8 199 aa12.39□□□□□ -0.43
HMGXB3-202ENST00000503427 IGHV4OR15-8A0A075B7B6 117 aa12.38□□□□□ -0.43
HMGXB3-202ENST00000503427 A0A087WW49 117 aa12.38□□□□□ -0.43
HMGXB3-202ENST00000503427 RNASE8Q8TDE3 154 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-202ENST00000503427 H0YGX0 51 aa12.38□□□□□ -0.43
HMGXB3-202ENST00000503427 C5orf38Q86SI9 138 aa12.38□□□□□ -0.43
HMGXB3-202ENST00000503427 ZNF843Q8N446 348 aa12.38□□□□□ -0.43
HMGXB3-202ENST00000503427 PTPRSQ13332 1948 aa12.37□□□□□ -0.43
HMGXB3-202ENST00000503427 C11orf86A6NJI1 115 aa12.37□□□□□ -0.43
HMGXB3-202ENST00000503427 CCDC168Q8NDH2 2452 aa12.37□□□□□ -0.43
HMGXB3-202ENST00000503427 C19orf84I3L1E1 186 aa12.37□□□□□ -0.43
HMGXB3-202ENST00000503427 LINC01620Q4KN68 170 aa12.37□□□□□ -0.43
HMGXB3-202ENST00000503427 WFDC2Q14508 124 aa12.36□□□□□ -0.43
HMGXB3-202ENST00000503427 SPANXCQ9NY87 97 aa12.36□□□□□ -0.43
HMGXB3-202ENST00000503427 ALPK3Q96L96 1907 aa12.36□□□□□ -0.43
HMGXB3-202ENST00000503427 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
HMGXB3-202ENST00000503427 A0A0J9YY99 117 aa12.36□□□□□ -0.43
HMGXB3-202ENST00000503427 EIF4EBP1Q13541 118 aaPredicted RBP12.36□□□□□ -0.43
HMGXB3-202ENST00000503427 TRAV4A0A0B4J268 109 aa12.36□□□□□ -0.43
HMGXB3-202ENST00000503427 ARHGAP21Q5T5U3 1957 aa12.35□□□□□ -0.43
HMGXB3-202ENST00000503427 MYCNOSP40205 109 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms