RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 POLR2JP52435 117 aaKnown RBP2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 CKS1BP61024 79 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 HSPE1P61604 102 aaKnown RBP2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 COPZ1P61923 177 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 IBA57Q5T440 356 aaKnown RBP2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 LINC00299Q6ZSB3 139 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 SMIM20Q8N5G0 67 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 SLC30A7Q8NEW0 376 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 OR5A1Q8NGJ0 315 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 SFT2D1Q8WV19 159 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 DERL1Q9BUN8 251 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 RNASE7Q9H1E1 156 aaKnown RBP2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 BCL2L10Q9HD36 194 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 TP73-AS1Q9UF72 201 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 BAIAP2Q9UQB8 552 aa2.42□□□□□ -2.02
HMGB1P3-201ENST00000502802 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 TRAV36DV7A0A075B6V5 113 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 TMSB15BA0A087X1C1 80 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 A0A0G2JQZ4 141 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 A0A1B0GX51 115 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 MAP1LC3B2A6NCE7 125 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 ARRDC5A6NEK1 342 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 OR2T1O43869 369 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 IGF2P01344 180 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 GLRXP35754 106 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 EVX1P49640 407 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 RRAS2P62070 204 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 CDK6Q00534 326 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 HES1Q14469 280 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 C12orf74Q32Q52 190 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 CROCCP2Q86T23 111 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 RPP25LQ8N5L8 163 aaKnown RBP2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 OR5H6Q8NGV6 325 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 SLC7A6Q92536 515 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 MAP1LC3BQ9GZQ8 125 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 SH3BGRL3Q9H299 93 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 ENY2Q9NPA8 101 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 UQCC1Q9NVA1 299 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 SCP2D1Q9UJQ7 156 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 ZFP30Q9Y2G7 519 aa2.41□□□□□ -2.02
HMGB1P3-201ENST00000502802 A0A1W2PRE2 83 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 TMEM189A5PLL7 270 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 B4DSR2 109 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 J3QQQ9 107 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 M0R143 59 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 M0R233 179 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 DEGS1O15121 323 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 SNAPC5O75971 98 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 DEFA4P12838 97 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 PPIBP23284 216 aaKnown RBP2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 SRP14P37108 136 aaKnown RBP2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 TMEM258P61165 79 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 CCL8P80075 99 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 Q6ZTI0 123 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 C12orf45Q8N5I9 185 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 ZCCHC13Q8WW36 166 aaKnown RBP2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 H1FXQ92522 213 aaKnown RBP2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 ARL11Q969Q4 196 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 TXNDC17Q9BRA2 123 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 CHST6Q9GZX3 395 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 CACYBPQ9HB71 228 aaKnown RBP2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 DYNLRB1Q9NP97 96 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 LYRM2Q9NU23 88 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 CCDC167Q9P0B6 97 aa2.4□□□□□ -2.03
HMGB1P3-201ENST00000502802 IGLV3-9A0A075B6K5 115 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 CPSF4LA6NMK7 179 aaKnown RBP2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 F6UZH7 168 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 H3BRN7 92 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 UBL3O95164 117 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 ZNF682O95780 498 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 ASAH2BP0C7U1 165 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 UBBP0CG47 229 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 TRAPPC2P0DI81 140 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 TRAPPC2BP0DI82 140 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 SMIM17P0DL12 118 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 P0DMU3 169 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 FAM231AP0DMU4 169 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 FAM231CP0DMU5 169 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 HIST1H1BP16401 226 aaKnown RBP2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 KRTAP10-1P60331 282 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 MORN2Q502X0 79 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 OCIAD2Q56VL3 154 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 SPRNQ5BIV9 151 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 TEX261Q6UWH6 196 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 Q8NDZ9 215 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 MED9Q9NWA0 146 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 METTL1Q9UBP6 276 aaKnown RBP2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 HSPB8Q9UJY1 196 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 TRAPPC2LQ9UL33 140 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 SSR3Q9UNL2 185 aa2.39□□□□□ -2.03
HMGB1P3-201ENST00000502802 KIAA2026Q5HYC2 2103 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 MEIKINA0A087WXM9 373 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 FXYD1O00168 92 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 AIPO00170 330 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 HMGB3O15347 200 aaKnown RBP2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 EVI2AP22794 236 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 NFYAP23511 347 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 RHEBQ15382 184 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 LTC4SQ16873 150 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms