RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SULT1A1P50225 295 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 SULT1A2P50226 295 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 LINC00315P59091 139 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 SLC38A11Q08AI6 406 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 PPP1R1AQ13522 171 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 TTC32Q5I0X7 151 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 DGAT2L7PQ6IED9 249 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 PATE2Q6UY27 113 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 TMEM183AQ8IXX5 376 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 TMEM256Q8N2U0 113 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 OR10G4Q8NGN3 311 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 OR1L4Q8NGR5 311 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 DEFB104AQ8WTQ1 72 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 TMEM263Q8WUH6 116 aaKnown RBP3.78□□□□□ -1.8
SPTA1-209ENST00000498708 CIB3Q96Q77 187 aaPredicted RBP3.78□□□□□ -1.8
SPTA1-209ENST00000498708 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 SHANK2-AS3Q9BTD1 123 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 V9GYY9 64 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 LPAP08519 4548 aa3.78□□□□□ -1.8
SPTA1-209ENST00000498708 A0A087WX48 190 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 A0A1B0GX51 115 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 DUXBA0A1W2PPF3 345 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 H7BYZ3 331 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 LYRM1O43325 122 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 SSSCA1O60232 199 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 HSBP1O75506 76 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 SFT2D2O95562 160 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 OXTP01178 125 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 IGHV3-53P01767 116 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 DNAH10OSP0CZ25 163 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 RPL7P18124 248 aaKnown RBP3.77□□□□□ -1.81
SPTA1-209ENST00000498708 TNFSF8P32971 234 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 ZNF345Q14585 488 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 TMEM183BQ1AE95 376 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 PYDC2Q56P42 97 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 GFI1BQ5VTD9 330 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 ZNF493Q6ZR52 646 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 Q6ZTI0 123 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 TOMM5Q8N4H5 51 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 OR10J6PQ8NGY7 276 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 RPL36ALQ969Q0 106 aaKnown RBP3.77□□□□□ -1.81
SPTA1-209ENST00000498708 SLC25A31Q9H0C2 315 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 Q9H3A6 140 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 UQCC1Q9NVA1 299 aa3.77□□□□□ -1.81
SPTA1-209ENST00000498708 MRPS16Q9Y3D3 137 aaKnown RBP3.77□□□□□ -1.81
SPTA1-209ENST00000498708 TRGV2A0A075B6R0 118 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 A0A087X0K7 114 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 TRAV5A0A0B4J249 113 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 F5H697 171 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 MRPS12O15235 138 aaKnown RBP3.76□□□□□ -1.81
SPTA1-209ENST00000498708 PLA2G10O15496 165 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 COX7A2P2O60397 106 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 GAS8-AS1O95177 125 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 FAUP35544 74 aaKnown RBP3.76□□□□□ -1.81
SPTA1-209ENST00000498708 PMVKQ15126 192 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 MRPL23Q16540 153 aaKnown RBP3.76□□□□□ -1.81
SPTA1-209ENST00000498708 VWC2Q2TAL6 325 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 FAM162BQ5T6X4 162 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 MORN5Q5VZ52 161 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 KCNIP4Q6PIL6 250 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 GTF2H5Q6ZYL4 71 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 NEGR1Q7Z3B1 354 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 LINC00305Q7Z4B0 112 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 LRTM2Q8N967 370 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 FER1L6-AS1Q8NA97 138 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 OR2T35Q8NGX2 323 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 TMEM18Q96B42 140 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 VSIG2Q96IQ7 327 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 YPEL4Q96NS1 127 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 NPVFQ9HCQ7 196 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 ZNF331Q9NQX6 463 aaPredicted RBP3.76□□□□□ -1.81
SPTA1-209ENST00000498708 NAT8BQ9UHF3 227 aa3.76□□□□□ -1.81
SPTA1-209ENST00000498708 A0A087WWC5 75 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 A0A0D9SG52 128 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 A0A1W2PRE2 83 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BKO60814 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 NXPH4O95158 308 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 SIX6O95475 246 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 IGKV2-30P06310 120 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BJP06899 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 CRYGDP07320 174 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 CT45A10P0DMU9 189 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 SLC25A6P12236 298 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 FABP4P15090 132 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BOP23527 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BBP33778 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 AMTP48728 403 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 NDUFA6P56556 154 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BDP58876 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 UBE2MP61081 183 aaKnown RBP3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BCP62807 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HSD52Q0P140 79 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 ARL16Q0P5N6 197 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 ERCC8Q13216 396 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST2H2BEQ16778 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.75□□□□□ -1.81
SPTA1-209ENST00000498708 LCN15Q6UWW0 184 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 ALKAL2Q6UX46 152 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms