RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 MED13LQ71F56 2210 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 MUC5ACP98088 5654 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 FAM236AA0A1B0GUQ0 79 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 FAM236BA0A1B0GV22 79 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 ZNF670-ZNF695F2Z2N8 137 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 CCL3L1P16619 93 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 NCS1P62166 190 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 Q5BKY6 102 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 LINC01545Q5VT33 79 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 FAM213BQ8TBF2 198 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 IFI27L1Q96BM0 104 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 SAR1AQ9NR31 198 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 BATF3Q9NR55 127 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 SOGA1O94964 1423 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 MYOM3Q5VTT5 1437 aa0.13□□□□□ -2.39
PSPC1-205ENST00000497722 SSC5DA1L4H1 1573 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 BDP1A6H8Y1 2624 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 TMEM2Q9UHN6 1383 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 KIAA0100Q14667 2235 aaKnown RBP0.12□□□□□ -2.39
PSPC1-205ENST00000497722 TCRBV3S1A0A5B6 114 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 RBAKDNA6NC62 111 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 PITX3O75364 302 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 TFF1P04155 84 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 LINC00694P0DN24 101 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 NPC2P61916 151 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 VSTM2AQ8TAG5 236 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 JMJD1CQ15652 2540 aa0.12□□□□□ -2.39
PSPC1-205ENST00000497722 CACNA1HO95180 2353 aa0.11□□□□□ -2.39
PSPC1-205ENST00000497722 MACF1Q9UPN3 7388 aaKnown RBP0.11□□□□□ -2.39
PSPC1-205ENST00000497722 GVQW2A0A096LPI5 108 aaPredicted RBP0.11□□□□□ -2.39
PSPC1-205ENST00000497722 CYP2G1PQ6ZSU1 146 aa0.11□□□□□ -2.39
PSPC1-205ENST00000497722 BPESC1Q9GZL8 116 aa0.11□□□□□ -2.39
PSPC1-205ENST00000497722 NDUFA12Q9UI09 145 aa0.11□□□□□ -2.39
PSPC1-205ENST00000497722 F5P12259 2224 aa0.11□□□□□ -2.39
PSPC1-205ENST00000497722 DAPK1P53355 1430 aa0.11□□□□□ -2.39
PSPC1-205ENST00000497722 ARFGEF1Q9Y6D6 1849 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 TTC28Q96AY4 2481 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 ANK2Q01484 3957 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 TRAV12-3A0A0B4J271 114 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 COX6A2Q02221 97 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 SSBP1Q04837 148 aaKnown RBP0.1□□□□□ -2.39
PSPC1-205ENST00000497722 SPCS2Q15005 226 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 SMIM21Q3B7S5 101 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 SPANXN1Q5VSR9 72 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 MIC13Q5XKP0 118 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 SLC48A1Q6P1K1 146 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 CTAGE3PQ8IX95 158 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 SMIM3Q9BZL3 60 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 PTPRZ1P23471 2315 aaPredicted RBP0.1□□□□□ -2.39
PSPC1-205ENST00000497722 BICRAQ9NZM4 1560 aa0.1□□□□□ -2.39
PSPC1-205ENST00000497722 M0R2Z0 102 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 NPFFO15130 113 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 SCIMPQ6UWF3 145 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 Q6ZUT4 128 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 SMIM11BQ8TCY0 68 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 COX7B2Q8TF08 81 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 MAFIPQ8WZ33 124 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 LZICQ8WZA0 190 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 ANP32BQ92688 251 aaKnown RBP0.09□□□□□ -2.4
PSPC1-205ENST00000497722 Q96NJ1 140 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 COPZ2Q9P299 210 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 LRRC37A3O60309 1634 aa0.09□□□□□ -2.4
PSPC1-205ENST00000497722 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.4
PSPC1-205ENST00000497722 J3QR89 54 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 M0R129 80 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 PIRTP0C851 137 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 COX4I1P13073 169 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 C9orf116Q5BN46 136 aaPredicted RBP0.08□□□□□ -2.4
PSPC1-205ENST00000497722 FAM74A4Q5TZK3 123 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 C4orf33Q8N1A6 199 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 C20orf197Q8N268 126 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 GRIN2AQ12879 1464 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 PXDNQ92626 1479 aa0.08□□□□□ -2.4
PSPC1-205ENST00000497722 NWD2Q9ULI1 1742 aa0.07□□□□□ -2.4
PSPC1-205ENST00000497722 CLPSL1A2RUU4 121 aa0.07□□□□□ -2.4
PSPC1-205ENST00000497722 UBE2D1P51668 147 aa0.07□□□□□ -2.4
PSPC1-205ENST00000497722 RPS25P62851 125 aaKnown RBP0.07□□□□□ -2.4
PSPC1-205ENST00000497722 SDF2Q99470 211 aa0.07□□□□□ -2.4
PSPC1-205ENST00000497722 TMEM242Q9NWH2 141 aa0.07□□□□□ -2.4
PSPC1-205ENST00000497722 SPEF2Q9C093 1822 aa0.07□□□□□ -2.4
PSPC1-205ENST00000497722 GOLGA3Q08378 1498 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 RRAS2P62070 204 aaPredicted RBP0.06□□□□□ -2.4
PSPC1-205ENST00000497722 SMCO1Q147U7 214 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 C10orf82Q8WW14 230 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 TMEM191AQ9H0A3 160 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 PAIP2BQ9ULR5 123 aaKnown RBP0.06□□□□□ -2.4
PSPC1-205ENST00000497722 V9GYV3 84 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 ABCA12Q86UK0 2595 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 PHLPP1O60346 1717 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 IGSF10Q6WRI0 2623 aa0.06□□□□□ -2.4
PSPC1-205ENST00000497722 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
PSPC1-205ENST00000497722 IBTKQ9P2D0 1353 aaPredicted RBP0.06□□□□□ -2.4
PSPC1-205ENST00000497722 IFT172Q9UG01 1749 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 PIEZO1Q92508 2521 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 TRBV7-1A0A0A6YYK4 115 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 K7ERU9 68 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 IFNA17P01571 189 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 APODP05090 189 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 IFITM1P13164 125 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms