RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LAMB1P07942 1786 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 AKAP12Q02952 1782 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 CASZ1Q86V15 1759 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 NUPR2A6NF83 97 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 FAM24AA6NFZ4 105 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 CCL25O15444 150 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 PPYP01298 95 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 SLC25A6P12236 298 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 ATP5EP56381 51 aaPredicted RBP1.5□□□□□ -2.17
CLK1-214ENST00000496205 PKIAP61925 76 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 C9orf116Q5BN46 136 aaPredicted RBP1.5□□□□□ -2.17
CLK1-214ENST00000496205 NCMAPQ5T1S8 102 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 LSM10Q969L4 123 aaKnown RBP1.5□□□□□ -2.17
CLK1-214ENST00000496205 LRP5O75197 1615 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 PCDH15Q96QU1 1955 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 ADAMTS12P58397 1594 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 ALPK3Q96L96 1907 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 MAP3K1Q13233 1512 aa1.5□□□□□ -2.17
CLK1-214ENST00000496205 MAGI1Q96QZ7 1491 aaPredicted RBP1.5□□□□□ -2.17
CLK1-214ENST00000496205 ALPK2Q86TB3 2170 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 CHD1O14646 1710 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 LRRIQ1Q96JM4 1722 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 FN1P02751 2386 aaKnown RBP1.49□□□□□ -2.17
CLK1-214ENST00000496205 EML5Q05BV3 1969 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 PVALEFA0A1B0GWK0 134 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 HIGD1CA8MV81 97 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 H3BQ15 152 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 HCRTO43612 131 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 IL7P13232 177 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 IL9P15248 144 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 DEFB103AP81534 67 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 UNQ6190/PRO20217Q6UXQ8 127 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 TTC9CQ8N5M4 171 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 MRPL35Q9NZE8 188 aaKnown RBP1.49□□□□□ -2.17
CLK1-214ENST00000496205 MRPL36Q9P0J6 103 aaKnown RBP1.49□□□□□ -2.17
CLK1-214ENST00000496205 TRPM7Q96QT4 1865 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 UGGT2Q9NYU1 1516 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 ICE1Q9Y2F5 2266 aa1.49□□□□□ -2.17
CLK1-214ENST00000496205 TTC37Q6PGP7 1564 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 TCRBV3S1A0A5B6 114 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 TMEM262E9PQX1 116 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 SSSCA1O60232 199 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 SPINK8P0C7L1 97 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 IQCJQ1A5X6 159 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 KRTAP13-4Q3LI77 160 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 SPATA45Q537H7 98 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 GDF5OSQ5U4N7 250 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 Q8N8P6 123 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 PTPRMP28827 1452 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 HEATR1Q9H583 2144 aaKnown RBP1.48□□□□□ -2.17
CLK1-214ENST00000496205 ADCY10Q96PN6 1610 aa1.48□□□□□ -2.17
CLK1-214ENST00000496205 NINQ8N4C6 2090 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 PHIPQ8WWQ0 1821 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 EFCAB5A4FU69 1503 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 PTPRDP23468 1912 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 IGKV3D-7A0A0C4DH55 119 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 IGKV3OR2-268A0A0C4DH90 116 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 TRBV10-3A0A0K0K1G6 114 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 TEX49A0A1B0GTD5 131 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 UBE2L5PA0A1B0GUS4 154 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 IGLV3-1P01715 115 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 IGKCP01834 107 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 UBE2L3P68036 154 aaKnown RBP1.47□□□□□ -2.17
CLK1-214ENST00000496205 DCDP81605 110 aaKnown RBP1.47□□□□□ -2.17
CLK1-214ENST00000496205 PCOTHQ58A44 107 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 DEFB132Q7Z7B7 95 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 C5orf38Q86SI9 138 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 ZNF563Q8TA94 476 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 ZNF625Q96I27 306 aaPredicted RBP1.47□□□□□ -2.17
CLK1-214ENST00000496205 ODF3Q96PU9 254 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 ABCC10Q5T3U5 1492 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 ZNF142P52746 1687 aaPredicted RBP1.47□□□□□ -2.17
CLK1-214ENST00000496205 TROQ12816 1431 aaPredicted RBP1.47□□□□□ -2.17
CLK1-214ENST00000496205 CR1P17927 2039 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 HMCN1Q96RW7 5635 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 CACNA1GO43497 2377 aa1.47□□□□□ -2.17
CLK1-214ENST00000496205 PCNX2A6NKB5 2137 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 GBF1Q92538 1859 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 CFAP43Q8NDM7 1665 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 IGKV3-7A0A075B6H7 116 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 OOSP1A8MZH6 123 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 DNAL4O96015 105 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 CCL8P80075 99 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 COL5A1-AS1Q5SY13 56 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 PPP1R1CQ8WVI7 109 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 WFDC10AQ9H1F0 79 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 AP4S1Q9Y587 144 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 GLI2P10070 1586 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 IQGAP2Q13576 1575 aa1.46□□□□□ -2.18
CLK1-214ENST00000496205 KIAA0586Q9BVV6 1533 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 PPRC1Q5VV67 1664 aaKnown RBP1.45□□□□□ -2.18
CLK1-214ENST00000496205 FREM1Q5H8C1 2179 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 BAZ2BQ9UIF8 2168 aaKnown RBP1.45□□□□□ -2.18
CLK1-214ENST00000496205 MCM3APO60318 1980 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 GAPVD1Q14C86 1478 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 CDK12Q9NYV4 1490 aaPredicted RBP1.45□□□□□ -2.18
CLK1-214ENST00000496205 KIAA0556O60303 1618 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 CCKP06307 115 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 S100A10P60903 97 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms