RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TRGV11A0A075B6L2 103 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 VCYO14598 125 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 TMEM86BQ8N661 226 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 NEXN-AS1Q8NBZ9 246 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 OR11H1Q8NG94 326 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 C4orf3Q8WVX3 66 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 JPT2Q9H910 190 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 MDFICQ9P1T7 246 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 CYSLTR1Q9Y271 337 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 NAV2Q8IVL1 2488 aa8.22□□□□□ -1.09
CMSS1-208ENST00000496116 TRAV2A0A0B4J234 112 aa8.21□□□□□ -1.09
CMSS1-208ENST00000496116 H3BRM9 83 aa8.21□□□□□ -1.09
CMSS1-208ENST00000496116 POLR2KP53803 58 aaKnown RBP8.21□□□□□ -1.09
CMSS1-208ENST00000496116 DEFB136Q30KP8 78 aa8.21□□□□□ -1.09
CMSS1-208ENST00000496116 FAM74A4Q5TZK3 123 aa8.21□□□□□ -1.09
CMSS1-208ENST00000496116 ZANQ9Y493 2812 aa8.21□□□□□ -1.1
CMSS1-208ENST00000496116 CREBBPQ92793 2442 aa8.21□□□□□ -1.1
CMSS1-208ENST00000496116 ZNF56Q15929 161 aa8.21□□□□□ -1.1
CMSS1-208ENST00000496116 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
CMSS1-208ENST00000496116 BAALCQ8WXS3 180 aa8.21□□□□□ -1.1
CMSS1-208ENST00000496116 TRBV25-1A0A075B6N4 114 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 TRBV6-5A0A0K0K1A5 114 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 SDHAF1A6NFY7 115 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 KRTAP1-3Q8IUG1 177 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 CHAC1Q9BUX1 264 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 CENPEQ02224 2701 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 TRAV8-6A0A0B4J262 113 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 DEFB131AP59861 70 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 AMMECR1LQ6DCA0 310 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 TTTY13Q9BZ97 58 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 AGRNO00468 2067 aa8.2□□□□□ -1.1
CMSS1-208ENST00000496116 TRBV27A0A0K0K1C4 114 aa8.19□□□□□ -1.1
CMSS1-208ENST00000496116 NEGR1Q7Z3B1 354 aa8.19□□□□□ -1.1
CMSS1-208ENST00000496116 DYNLRB2Q8TF09 96 aa8.19□□□□□ -1.1
CMSS1-208ENST00000496116 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
CMSS1-208ENST00000496116 C9orf118A6NHY6 69 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 OR11H12B2RN74 326 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 GCSHP23434 173 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 ZNF876PQ49A33 203 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 TRPT1Q86TN4 253 aaKnown RBP8.18□□□□□ -1.1
CMSS1-208ENST00000496116 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 OR11H2Q8NH07 326 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 KNCNA6PVL3 124 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 K7EP13 123 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 CRYGDP07320 174 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 PAPPA-AS1Q5QFB9 102 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 ABCA12Q86UK0 2595 aa8.18□□□□□ -1.1
CMSS1-208ENST00000496116 MXRA5Q9NR99 2828 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 A8MTW9 85 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 H3BMM0 161 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 M0QY20 66 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 TMEM61Q8N0U2 210 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 RIPPLY3P57055 190 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 TAL2Q16559 108 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 DLX4Q92988 240 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-208ENST00000496116 DUX3Q96PT4 197 aa8.17□□□□□ -1.1
CMSS1-208ENST00000496116 ZNF256Q9Y2P7 627 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-208ENST00000496116 GAGE10A6NGK3 116 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 SMIM13P0DJ93 91 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 PMVKQ15126 192 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 Q6ZSV7 163 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 CEND1Q8N111 149 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 MAPKAPK5-AS1Q8N8E1 139 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 JMJD8Q96S16 334 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 TEX15Q9BXT5 2789 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 SORL1Q92673 2214 aa8.16□□□□□ -1.1
CMSS1-208ENST00000496116 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
CMSS1-208ENST00000496116 E9PLD3 99 aa8.15□□□□□ -1.1
CMSS1-208ENST00000496116 H3BUT2 72 aa8.15□□□□□ -1.1
CMSS1-208ENST00000496116 HTN1P15515 57 aa8.15□□□□□ -1.1
CMSS1-208ENST00000496116 RHOHQ15669 191 aa8.15□□□□□ -1.1
CMSS1-208ENST00000496116 RAB37Q96AX2 223 aa8.15□□□□□ -1.1
CMSS1-208ENST00000496116 TM2D2Q9BX73 214 aa8.15□□□□□ -1.1
CMSS1-208ENST00000496116 DNAJC9-AS1A6NH13 148 aa8.15□□□□□ -1.11
CMSS1-208ENST00000496116 RBMY1A1P0DJD3 496 aaKnown RBP8.15□□□□□ -1.11
CMSS1-208ENST00000496116 RBMY1CP0DJD4 496 aa8.15□□□□□ -1.11
CMSS1-208ENST00000496116 FXYD2P54710 66 aa8.15□□□□□ -1.11
CMSS1-208ENST00000496116 RBMY1FQ15415 496 aaKnown RBP8.15□□□□□ -1.11
CMSS1-208ENST00000496116 NSUN5P1Q3KNT7 163 aa8.15□□□□□ -1.11
CMSS1-208ENST00000496116 MAP6D1Q9H9H5 199 aa8.15□□□□□ -1.11
CMSS1-208ENST00000496116 I3L3M4 83 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 TSHBP01222 138 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 HERVK_113P61574 105 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 RPL39P62891 51 aaKnown RBP8.14□□□□□ -1.11
CMSS1-208ENST00000496116 DEFB114Q30KQ6 69 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 MORN3Q6PF18 240 aaPredicted RBP8.14□□□□□ -1.11
CMSS1-208ENST00000496116 RAX2Q96IS3 184 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 SPAG8Q99932 426 aaPredicted RBP8.14□□□□□ -1.11
CMSS1-208ENST00000496116 ZNF415Q09FC8 603 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 SCGB2A2Q13296 93 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 PIK3CD-AS1Q5SR53 167 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms