RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 BCORL1Q5H9F3 1711 aa1.8□□□□□ -2.12
SRRM1-218ENST00000494934 ALPK3Q96L96 1907 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 TRAV17A0A0B4J275 112 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 HCRTO43612 131 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 PITX3O75364 302 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 MIR22HGQ0VDD5 57 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 FAM74A1Q5RGS3 127 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 C10orf105Q8TEF2 133 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 MGST2Q99735 147 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 ORMDL1Q9P0S3 153 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 ARHGAP35Q9NRY4 1499 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 ARHGAP5Q13017 1502 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 KDM6BO15054 1643 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 TECTAO75443 2155 aa1.79□□□□□ -2.12
SRRM1-218ENST00000494934 KIDINS220Q9ULH0 1771 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-218ENST00000494934 ABCC3O15438 1527 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 MED14O60244 1454 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 MAGI1Q96QZ7 1491 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-218ENST00000494934 CEP162Q5TB80 1403 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 TRBV6-8A0A0A6YYG3 113 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 IGKV3D-7A0A0C4DH55 119 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 IGKV3OR2-268A0A0C4DH90 116 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 NAP1L6A6NFF2 107 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 F8W1H4 67 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 H3BRM9 83 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 LYNX1P0DP58 116 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 SNCAP37840 140 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 C1orf137Q5JT78 98 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 SLC48A1Q6P1K1 146 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 LINC00299Q6ZSB3 139 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 COMMD6Q7Z4G1 85 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 SBSPONQ8IVN8 264 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 FAM19A2Q8N3H0 131 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 DEFB119Q8N690 84 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 LSM10Q969L4 123 aaKnown RBP1.78□□□□□ -2.12
SRRM1-218ENST00000494934 S100A13Q99584 98 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 NDUFA12Q9UI09 145 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 RABAC1Q9UI14 185 aa1.78□□□□□ -2.12
SRRM1-218ENST00000494934 DOCK1Q14185 1865 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 SPHKAPQ2M3C7 1700 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 UACAQ9BZF9 1416 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 TRBV10-3A0A0K0K1G6 114 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 IGKV2-29A2NJV5 120 aaPredicted RBP1.77□□□□□ -2.13
SRRM1-218ENST00000494934 NDUFC1O43677 76 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 IGHV3-33P01772 117 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 IGLC1P0CG04 106 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 UBE2G1P62253 170 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 PEA15Q15121 130 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 MPV17LQ2QL34 196 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 PYY3Q5JQD4 70 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 ZNF833PQ6ZTB9 187 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 CYP4F30PQ9H0H9 118 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 DPH3P1Q9H4G8 78 aa1.77□□□□□ -2.13
SRRM1-218ENST00000494934 MRPL35Q9NZE8 188 aaKnown RBP1.77□□□□□ -2.13
SRRM1-218ENST00000494934 CPSF1Q10570 1443 aaKnown RBP1.76□□□□□ -2.13
SRRM1-218ENST00000494934 ANKRD36BQ8N2N9 1353 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 MGAMO43451 1857 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 KIAA1549LQ6ZVL6 1849 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 ATOX1O00244 68 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 GNGT2O14610 69 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 Q0VG73 95 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 KRTAP21-3Q3LHN1 58 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 C9orf116Q5BN46 136 aaPredicted RBP1.76□□□□□ -2.13
SRRM1-218ENST00000494934 Q8N8P6 123 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 PMCHL2Q9BQD1 86 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 NINQ8N4C6 2090 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 MCM3APO60318 1980 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 TCHHQ07283 1943 aa1.76□□□□□ -2.13
SRRM1-218ENST00000494934 IFT140Q96RY7 1462 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 C10orf71Q711Q0 1435 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 UNC13CQ8NB66 2214 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 ABCA3Q99758 1704 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 KDM5AP29375 1690 aaKnown RBP1.75□□□□□ -2.13
SRRM1-218ENST00000494934 IL7P13232 177 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 GNG11P61952 73 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 RBM3P98179 157 aaKnown RBP1.75□□□□□ -2.13
SRRM1-218ENST00000494934 S100A7L2Q5SY68 101 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 PPP1R1CQ8WVI7 109 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 DMAC1Q96GE9 116 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 DSCR8Q96T75 97 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 PRO1933Q9H354 126 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 PTPRFP10586 1907 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 ERICH3Q5RHP9 1530 aa1.75□□□□□ -2.13
SRRM1-218ENST00000494934 MYO18AQ92614 2054 aaKnown RBP1.75□□□□□ -2.13
SRRM1-218ENST00000494934 PLXNA2O75051 1894 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 IGKV3-7A0A075B6H7 116 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 TRAV23DV6A0A075B6W5 121 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 IGLV3-32A0A0A0MS00 114 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 TRAV13-2A0A0B4J235 113 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 TRBV10-1A0A0K0K1A3 114 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 RBAKDNA6NC62 111 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 H3BQF6 201 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 CYB5AP00167 134 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 SMIM11AP58511 58 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 CCL8P80075 99 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 INSL4Q14641 139 aa1.74□□□□□ -2.13
SRRM1-218ENST00000494934 LINC00052Q96N35 136 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms