RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 JPT2Q9H910 190 aa8.82□□□□□ -1
HDAC4-210ENST00000493582 ZNF580Q9UK33 172 aa8.82□□□□□ -1
HDAC4-210ENST00000493582 BDP1A6H8Y1 2624 aa8.82□□□□□ -1
HDAC4-210ENST00000493582 C16orf92Q96LL3 132 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 A0A0B4J2C4 111 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 ADARB2-AS1A8MUL3 147 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 ECSCRQ19T08 205 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 ZNF876PQ49A33 203 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 PIEZO2Q9H5I5 2752 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 CUL9Q8IWT3 2517 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 H7C423 109 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 C20orf173Q96LM9 149 aa8.81□□□□□ -1
HDAC4-210ENST00000493582 MUC4Q99102 2169 aa8.8□□□□□ -1
HDAC4-210ENST00000493582 IGHV7-81A0A0B4J1V7 117 aa8.8□□□□□ -1
HDAC4-210ENST00000493582 IGHV1-69DA0A0B4J2H0 117 aa8.8□□□□□ -1
HDAC4-210ENST00000493582 PRSS2P07478 247 aa8.8□□□□□ -1
HDAC4-210ENST00000493582 Q6ZSV7 163 aa8.8□□□□□ -1
HDAC4-210ENST00000493582 ZFAND2AQ8N6M9 145 aa8.8□□□□□ -1
HDAC4-210ENST00000493582 A0A0G2JNJ9 132 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
HDAC4-210ENST00000493582 LINC01587Q99440 93 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 Q9UFV3 132 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 A0A087WWL8 130 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 ZNF22P17026 224 aaPredicted RBP8.79□□□□□ -1
HDAC4-210ENST00000493582 YAE1D1Q9NRH1 226 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 F5H697 171 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 LY6HO94772 140 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 RNASE3P12724 160 aaKnown RBP8.79□□□□□ -1
HDAC4-210ENST00000493582 POLR2KP53803 58 aaKnown RBP8.79□□□□□ -1
HDAC4-210ENST00000493582 CLEC2BQ92478 149 aa8.79□□□□□ -1
HDAC4-210ENST00000493582 TRAV21A0A0B4J279 112 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 TRBV30A0A0K0K1B3 111 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 UBE2E1P51965 193 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 LINC00315P59091 139 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 TMEM141Q96I45 108 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 CCDC140Q96MF4 163 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 ZNF256Q9Y2P7 627 aaPredicted RBP8.78□□□□□ -1
HDAC4-210ENST00000493582 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
HDAC4-210ENST00000493582 SDHAF1A6NFY7 115 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 METTL26Q96S19 204 aa8.78□□□□□ -1
HDAC4-210ENST00000493582 SPTBN1Q01082 2364 aaKnown RBP8.78□□□□□ -1
HDAC4-210ENST00000493582 TMEM223A0PJW6 202 aa8.77□□□□□ -1
HDAC4-210ENST00000493582 F6UB75 175 aa8.77□□□□□ -1
HDAC4-210ENST00000493582 PPP1R17O96001 155 aa8.77□□□□□ -1
HDAC4-210ENST00000493582 NPC2P61916 151 aa8.77□□□□□ -1
HDAC4-210ENST00000493582 TIMM17AQ99595 171 aa8.77□□□□□ -1
HDAC4-210ENST00000493582 TRGV11A0A075B6L2 103 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 VCYO14598 125 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 LEPROTO15243 131 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 PF4V1P10720 104 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 CEMP1Q6PRD7 247 aaPredicted RBP8.77□□□□□ -1.01
HDAC4-210ENST00000493582 FAM236AA0A1B0GUQ0 79 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 FAM236BA0A1B0GV22 79 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 G3V318 75 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 SUMO4Q6EEV6 95 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 MRPL53Q96EL3 112 aaKnown RBP8.77□□□□□ -1.01
HDAC4-210ENST00000493582 SPANXA1Q9NS26 97 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 KIF25-AS1Q9Y6Z4 181 aa8.77□□□□□ -1.01
HDAC4-210ENST00000493582 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
HDAC4-210ENST00000493582 TMEM126AQ9H061 195 aa8.76□□□□□ -1.01
HDAC4-210ENST00000493582 A0A0J9YXY3 114 aa8.76□□□□□ -1.01
HDAC4-210ENST00000493582 M0R2P5 195 aa8.76□□□□□ -1.01
HDAC4-210ENST00000493582 ICOSQ9Y6W8 199 aa8.76□□□□□ -1.01
HDAC4-210ENST00000493582 RIF1Q5UIP0 2472 aaKnown RBP8.75□□□□□ -1.01
HDAC4-210ENST00000493582 IGKV3-7A0A075B6H7 116 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 A0A0J9YXV3 536 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 SPXQ9BT56 116 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 IGHV4OR15-8A0A075B7B6 117 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 A0A087WW49 117 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 OOSP1A8MZH6 123 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 FAM74A4Q5TZK3 123 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 IGF2-ASQ6U949 168 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 ATP6V0E1O15342 81 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 VMO1Q7Z5L0 202 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 LY6G5BQ8NDX9 201 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 LINC00477Q96M19 166 aa8.75□□□□□ -1.01
HDAC4-210ENST00000493582 PTPRZ1P23471 2315 aaPredicted RBP8.74□□□□□ -1.01
HDAC4-210ENST00000493582 B9A039 149 aa8.74□□□□□ -1.01
HDAC4-210ENST00000493582 DEFB123Q8N688 67 aa8.74□□□□□ -1.01
HDAC4-210ENST00000493582 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
HDAC4-210ENST00000493582 Q8N6K4 173 aa8.74□□□□□ -1.01
HDAC4-210ENST00000493582 Q8N9W7 124 aa8.74□□□□□ -1.01
HDAC4-210ENST00000493582 ITLN2Q8WWU7 325 aaPredicted RBP8.74□□□□□ -1.01
HDAC4-210ENST00000493582 LENEPQ9Y5L5 61 aa8.74□□□□□ -1.01
HDAC4-210ENST00000493582 TRAV8-3A0A0A6YYJ7 113 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 TRBV7-7A0A0K0K1E9 115 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 ODF3BA8MYP8 253 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 CD3EP07766 207 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 EBI3Q14213 229 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 MRPL23Q16540 153 aaKnown RBP8.73□□□□□ -1.01
HDAC4-210ENST00000493582 FAM110DQ8TAY7 271 aaPredicted RBP8.73□□□□□ -1.01
HDAC4-210ENST00000493582 ACACAQ13085 2346 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 PRRC2AP48634 2157 aaKnown RBP8.73□□□□□ -1.01
HDAC4-210ENST00000493582 H3BT86 120 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 EEF1AKMT3Q96AZ1 226 aa8.73□□□□□ -1.01
HDAC4-210ENST00000493582 RPL11P62913 178 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms