RNA–Protein interactions for RNA: ENST00000493116.5

SOX2-OT-214, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-214ENST00000493116 AKAP9Q99996 3911 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 ZANQ9Y493 2812 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 IGHV3-49A0A0A0MS15 119 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 TRAV8-1A0A0A6YYK1 113 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 TMEM213A2RRL7 107 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 TMEM189A5PLL7 270 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 C2orf70A6NJV1 201 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 CRLF1O75462 422 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 HLA-DQA1P01909 254 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 CXCL1P09341 107 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 TSPOP30536 169 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 EBLN2Q6P2I7 272 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 C10orf99Q6UWK7 81 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 OR2D3Q8NGH3 330 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 SPATA3Q8NHX4 192 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 DYNLRB2Q8TF09 96 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 VSIG2Q96IQ7 327 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 ODF3Q96PU9 254 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 ZMAT5Q9UDW3 170 aaKnown RBP3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 TRAPPC1Q9Y5R8 145 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 ITPR3Q14573 2671 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 MXRA5Q9NR99 2828 aa3.88□□□□□ -1.79
SOX2-OT-214ENST00000493116 ITPR2Q14571 2701 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 IGKV2-40A0A087WW87 121 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 TRAV8-2A0A0B4J237 113 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 OR4C46A6NHA9 309 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIGD1CA8MV81 97 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 ZNF705FA8MVS1 300 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 F2Z2F3 143 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 IGKV2D-40P01614 121 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 TRGC2P03986 189 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 TCTEX1D4Q5JR98 221 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 NDUFA11Q86Y39 141 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 RNF182Q8N6D2 247 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 NUP35Q8NFH5 326 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 OR8A1Q8NGG7 326 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 OR2K2Q8NGT1 345 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 GTSF1Q8WW33 167 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 FRZBQ92765 325 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 ZC2HC1AQ96GY0 325 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 AGPAT4-IT1Q9H0P7 198 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 MS4A6AQ9H2W1 248 aa3.87□□□□□ -1.79
SOX2-OT-214ENST00000493116 CCDC168Q8NDH2 2452 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 CSMD2Q7Z408 3487 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 TRAV21A0A0B4J279 112 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 A0A1B0GUT8 65 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 A6NDN8 102 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 SH2D1AO60880 128 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 APCSP02743 223 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 ORM1P02763 201 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 GPX1P07203 203 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 CD28P10747 220 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 CRISP2P16562 243 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 MT3P25713 68 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 HLA-DMBP28068 263 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 RAB4BP61018 213 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 HBBP68871 147 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 FABP9Q0Z7S8 132 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 ACTL10Q5JWF8 245 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 FOXI2Q6ZQN5 318 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 SMIM15Q7Z3B0 74 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 ZFP82Q8N141 532 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 DCANP1Q8TF63 244 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 KCNS1Q96KK3 526 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 SMR3AQ99954 134 aa3.86□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIVEP2P31629 2446 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 FLNAP21333 2647 aaKnown RBP3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 IGKV3-7A0A075B6H7 116 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 LOC105371267A0A1B0GV96 52 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 SIVA1O15304 175 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BKO60814 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BJP06899 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 TRGC1P0CF51 173 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 PRB4P10163 310 aaPredicted RBP3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BOP23527 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 S100A2P29034 98 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BBP33778 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 TCL1AP56279 114 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BDP58876 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BCP62807 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 ERCC8Q13216 396 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 SLAQ13239 276 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST2H2BEQ16778 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 DEFB114Q30KQ6 69 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 PSMG4Q5JS54 123 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 MRPL54Q6P161 138 aaKnown RBP3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BHQ93079 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BNQ99877 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 HIST1H2BMQ99879 126 aa3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 ZNF256Q9Y2P7 627 aaPredicted RBP3.85□□□□□ -1.79
SOX2-OT-214ENST00000493116 A0A0J9YX75 114 aa3.84□□□□□ -1.79
SOX2-OT-214ENST00000493116 RBMY1BA6NDE4 496 aaKnown RBP3.84□□□□□ -1.79
SOX2-OT-214ENST00000493116 RBMY1EA6NEQ0 496 aaKnown RBP3.84□□□□□ -1.79
SOX2-OT-214ENST00000493116 SMKR1H3BMG3 65 aa3.84□□□□□ -1.79
SOX2-OT-214ENST00000493116 RBMY1DP0C7P1 496 aaKnown RBP3.84□□□□□ -1.79
SOX2-OT-214ENST00000493116 ZNF688P0C7X2 276 aa3.84□□□□□ -1.79
SOX2-OT-214ENST00000493116 RBMY1A1P0DJD3 496 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms