RNA–Protein interactions for RNA: ENST00000493116.5

SOX2-OT-214, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-214ENST00000493116 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
SOX2-OT-214ENST00000493116 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
SOX2-OT-214ENST00000493116 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
SOX2-OT-214ENST00000493116 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
SOX2-OT-214ENST00000493116 FOXD1Q16676 465 aa16.22■□□□□ 0.19
SOX2-OT-214ENST00000493116 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.16
SOX2-OT-214ENST00000493116 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
SOX2-OT-214ENST00000493116 ADRA2BP18089 450 aa15.42■□□□□ 0.06
SOX2-OT-214ENST00000493116 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-214ENST00000493116 MSH5O43196 834 aa15.03■□□□□ -0
SOX2-OT-214ENST00000493116 KCNA4P22459 653 aa14.24□□□□□ -0.13
SOX2-OT-214ENST00000493116 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
SOX2-OT-214ENST00000493116 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
SOX2-OT-214ENST00000493116 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
SOX2-OT-214ENST00000493116 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
SOX2-OT-214ENST00000493116 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
SOX2-OT-214ENST00000493116 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
SOX2-OT-214ENST00000493116 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
SOX2-OT-214ENST00000493116 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
SOX2-OT-214ENST00000493116 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
SOX2-OT-214ENST00000493116 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
SOX2-OT-214ENST00000493116 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-214ENST00000493116 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
SOX2-OT-214ENST00000493116 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-214ENST00000493116 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
SOX2-OT-214ENST00000493116 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
SOX2-OT-214ENST00000493116 ZBTB22O15209 634 aa13.07□□□□□ -0.32
SOX2-OT-214ENST00000493116 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
SOX2-OT-214ENST00000493116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
SOX2-OT-214ENST00000493116 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
SOX2-OT-214ENST00000493116 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
SOX2-OT-214ENST00000493116 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
SOX2-OT-214ENST00000493116 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
SOX2-OT-214ENST00000493116 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-214ENST00000493116 U3KPZ7 1027 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-214ENST00000493116 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
SOX2-OT-214ENST00000493116 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
SOX2-OT-214ENST00000493116 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-214ENST00000493116 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-214ENST00000493116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-214ENST00000493116 HNRNPUL2Q1KMD3 747 aaKnown RBP12.42□□□□□ -0.42
SOX2-OT-214ENST00000493116 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-214ENST00000493116 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
SOX2-OT-214ENST00000493116 APLP2Q06481 763 aa12.34□□□□□ -0.43
SOX2-OT-214ENST00000493116 CAPN15O75808 1086 aa12.31□□□□□ -0.44
SOX2-OT-214ENST00000493116 FKBP8Q14318 412 aa12.31□□□□□ -0.44
SOX2-OT-214ENST00000493116 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-214ENST00000493116 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-214ENST00000493116 DSG3P32926 999 aa12.18□□□□□ -0.46
SOX2-OT-214ENST00000493116 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-214ENST00000493116 ABCB7O75027 752 aa12.06□□□□□ -0.48
SOX2-OT-214ENST00000493116 POLA2Q14181 598 aa11.97□□□□□ -0.49
SOX2-OT-214ENST00000493116 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
SOX2-OT-214ENST00000493116 ZBTB12Q9Y330 459 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-214ENST00000493116 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
SOX2-OT-214ENST00000493116 PROM2Q8N271 834 aa11.63□□□□□ -0.55
SOX2-OT-214ENST00000493116 FBLN2P98095 1184 aa11.62□□□□□ -0.55
SOX2-OT-214ENST00000493116 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
SOX2-OT-214ENST00000493116 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
SOX2-OT-214ENST00000493116 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
SOX2-OT-214ENST00000493116 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
SOX2-OT-214ENST00000493116 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
SOX2-OT-214ENST00000493116 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
SOX2-OT-214ENST00000493116 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
SOX2-OT-214ENST00000493116 SPDYE2Q495Y8 402 aa11.43□□□□□ -0.58
SOX2-OT-214ENST00000493116 IFNLR1Q8IU57 520 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-214ENST00000493116 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
SOX2-OT-214ENST00000493116 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
SOX2-OT-214ENST00000493116 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
SOX2-OT-214ENST00000493116 NISCHQ9Y2I1 1504 aa11.38□□□□□ -0.59
SOX2-OT-214ENST00000493116 BCANQ96GW7 911 aa11.37□□□□□ -0.59
SOX2-OT-214ENST00000493116 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-214ENST00000493116 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
SOX2-OT-214ENST00000493116 PKD2Q13563 968 aa11.32□□□□□ -0.6
SOX2-OT-214ENST00000493116 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
SOX2-OT-214ENST00000493116 REM2Q8IYK8 340 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-214ENST00000493116 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-214ENST00000493116 BBXQ8WY36 941 aaPredicted RBP11.25□□□□□ -0.61
SOX2-OT-214ENST00000493116 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
SOX2-OT-214ENST00000493116 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
SOX2-OT-214ENST00000493116 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
SOX2-OT-214ENST00000493116 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
SOX2-OT-214ENST00000493116 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
SOX2-OT-214ENST00000493116 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
SOX2-OT-214ENST00000493116 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
SOX2-OT-214ENST00000493116 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-214ENST00000493116 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-214ENST00000493116 POTEHQ6S545 545 aa11.08□□□□□ -0.64
SOX2-OT-214ENST00000493116 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
SOX2-OT-214ENST00000493116 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-214ENST00000493116 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
SOX2-OT-214ENST00000493116 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
SOX2-OT-214ENST00000493116 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
SOX2-OT-214ENST00000493116 PRKCSHP14314 528 aaPredicted RBP11.02□□□□□ -0.65
SOX2-OT-214ENST00000493116 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
SOX2-OT-214ENST00000493116 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
SOX2-OT-214ENST00000493116 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
SOX2-OT-214ENST00000493116 CFAP44Q96MT7 982 aa11□□□□□ -0.65
SOX2-OT-214ENST00000493116 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
SOX2-OT-214ENST00000493116 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms