RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 GAGE5Q13069 117 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 ZNF345Q14585 488 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 ZNF674Q2M3X9 581 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 RGS21Q2M5E4 152 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 LINC01559Q495D7 138 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 GAGE13Q4V321 117 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 Q5BKY6 102 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 UFSP1Q6NVU6 142 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 ZC2HC1AQ96GY0 325 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 SFRP2Q96HF1 295 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 FAT1Q14517 4588 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 ARPC5O15511 151 aa5.84□□□□□ -1.47
NUP50-217ENST00000491860 SH2D1AO60880 128 aa5.84□□□□□ -1.47
NUP50-217ENST00000491860 PFDN1O60925 122 aa5.84□□□□□ -1.47
NUP50-217ENST00000491860 CXCL1P09341 107 aa5.84□□□□□ -1.47
NUP50-217ENST00000491860 AKR1C3P42330 323 aa5.84□□□□□ -1.47
NUP50-217ENST00000491860 RPL36AP83881 106 aaKnown RBP5.84□□□□□ -1.47
NUP50-217ENST00000491860 CST9LP1Q5W188 147 aa5.84□□□□□ -1.47
NUP50-217ENST00000491860 RPL36ALQ969Q0 106 aaKnown RBP5.84□□□□□ -1.47
NUP50-217ENST00000491860 A0A087WX48 190 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 M0R036 132 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 Q0VG73 95 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 TMEM97Q5BJF2 176 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 DMRTA1Q5VZB9 504 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 Q6ZSN1 163 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 Q8N976 141 aa5.83□□□□□ -1.48
NUP50-217ENST00000491860 TRBV7-3A0A075B6L6 115 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 A0A0D9SG52 128 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 M0R381 172 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
NUP50-217ENST00000491860 FUSP35637 526 aaKnown RBP eCLIP5.82□□□□□ -1.48
NUP50-217ENST00000491860 CRIP1P50238 77 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 RAB4BP61018 213 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 C14orf177Q52M58 125 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 NIT1Q86X76 327 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 KCNRGQ8N5I3 272 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
NUP50-217ENST00000491860 MBD3L1Q8WWY6 194 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 SAMD10Q9BYL1 202 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 CYTL1Q9NRR1 136 aa5.82□□□□□ -1.48
NUP50-217ENST00000491860 KANTRA0A1W2PQU2 76 aa5.81□□□□□ -1.48
NUP50-217ENST00000491860 GRIFINA4D1Z8 144 aa5.81□□□□□ -1.48
NUP50-217ENST00000491860 HMSDA8MTL9 139 aa5.81□□□□□ -1.48
NUP50-217ENST00000491860 DAZ4Q86SG3 579 aaKnown RBP5.81□□□□□ -1.48
NUP50-217ENST00000491860 OR10G8Q8NGN5 311 aa5.81□□□□□ -1.48
NUP50-217ENST00000491860 SFT2D1Q8WV19 159 aa5.81□□□□□ -1.48
NUP50-217ENST00000491860 ZNF471Q9BX82 626 aaPredicted RBP5.81□□□□□ -1.48
NUP50-217ENST00000491860 JPT2Q9H910 190 aa5.81□□□□□ -1.48
NUP50-217ENST00000491860 DAZ3Q9NR90 486 aaKnown RBP5.81□□□□□ -1.48
NUP50-217ENST00000491860 SRRM2Q9UQ35 2752 aaKnown RBP5.81□□□□□ -1.48
NUP50-217ENST00000491860 DNAH8Q96JB1 4490 aa5.81□□□□□ -1.48
NUP50-217ENST00000491860 A0A087WWL8 130 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 TMSB15BA0A087X1C1 80 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 G3V3Q6 166 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 TEX46H3BTG2 121 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 PAGE4O60829 102 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 CRPP02741 224 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 SMIM17P0DL12 118 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 UBE2D3P61077 147 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 UBE2D2P62837 147 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 SPANXN1Q5VSR9 72 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 BAGE2Q86Y30 109 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 FAM213BQ8TBF2 198 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 MANBALQ9NQG1 85 aa5.8□□□□□ -1.48
NUP50-217ENST00000491860 IGKV2D-24A0A075B6R9 120 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 TRBV6-8A0A0A6YYG3 113 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 RBFOX3A6NFN3 312 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 BCL2L11O43521 198 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 SNAI2O43623 268 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
NUP50-217ENST00000491860 H2AFB1P0C5Y9 115 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 OR5AL1P0C617 328 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 RAB5CP51148 216 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 ZNF56Q15929 161 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 EIF5AL1Q6IS14 154 aaKnown RBP5.79□□□□□ -1.48
NUP50-217ENST00000491860 ATRAIDQ6UW56 229 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 Q6ZSA8 131 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 SMIM12Q96EX1 92 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 C1orf43Q9BWL3 253 aa5.79□□□□□ -1.48
NUP50-217ENST00000491860 TMEM262E9PQX1 116 aa5.78□□□□□ -1.48
NUP50-217ENST00000491860 RPS20P60866 119 aaKnown RBP5.78□□□□□ -1.48
NUP50-217ENST00000491860 PRR27Q6MZM9 219 aa5.78□□□□□ -1.48
NUP50-217ENST00000491860 UBE2WQ96B02 151 aa5.78□□□□□ -1.48
NUP50-217ENST00000491860 AP1S3Q96PC3 154 aa5.78□□□□□ -1.48
NUP50-217ENST00000491860 MLST8Q9BVC4 326 aa5.78□□□□□ -1.48
NUP50-217ENST00000491860 SSBP4Q9BWG4 385 aaPredicted RBP5.78□□□□□ -1.48
NUP50-217ENST00000491860 BIN3Q9NQY0 253 aa5.78□□□□□ -1.48
NUP50-217ENST00000491860 KLK12Q9UKR0 248 aa5.78□□□□□ -1.48
NUP50-217ENST00000491860 FLG2Q5D862 2391 aaPredicted RBP5.78□□□□□ -1.48
NUP50-217ENST00000491860 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.77□□□□□ -1.49
NUP50-217ENST00000491860 SCO2A0A1W2PP80 73 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 XKRY2A2RUG3 117 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 F5H697 171 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 H7C1H1 209 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 MIAQ16674 131 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 TMUB2Q71RG4 321 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 Q8N3U1 123 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 NEXN-AS1Q8NBZ9 246 aa5.77□□□□□ -1.49
NUP50-217ENST00000491860 OR10AG1Q8NH19 301 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms