RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 GAGE1Q13065 139 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 GAGE4Q13068 117 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 GAGE5Q13069 117 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 FAM74A4Q5TZK3 123 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 VAX2Q9UIW0 290 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 GRIFINA4D1Z8 144 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 IBA57-AS1B1ANH7 110 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 M0R381 172 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 IGHV3-30P01768 117 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 IGHV3-33P01772 117 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 BCL2P10415 239 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 CCL20P78556 96 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 LAGE3Q14657 143 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 COX11Q9Y6N1 276 aa11.21□□□□□ -0.61
PDLIM2-217ENST00000491330 hCG_2014768A0A024R1R8 64 aa11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 TMSB15BA0A087X1C1 80 aa11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 NDUFS6O75380 124 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 RMI2Q96E14 147 aa11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 Q9HAA7 133 aa11.2□□□□□ -0.62
PDLIM2-217ENST00000491330 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-217ENST00000491330 ELOBQ15370 118 aa11.19□□□□□ -0.62
PDLIM2-217ENST00000491330 Q8N1X5 172 aa11.19□□□□□ -0.62
PDLIM2-217ENST00000491330 NTN5Q8WTR8 489 aaPredicted RBP11.19□□□□□ -0.62
PDLIM2-217ENST00000491330 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-217ENST00000491330 TRBV10-1A0A0K0K1A3 114 aa11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 XKRY2A2RUG3 117 aa11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 GNG4P50150 75 aa11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 RPS20P60866 119 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 DAZAP1Q96EP5 407 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 SFRP2Q96HF1 295 aa11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 DNAH2Q9P225 4427 aa11.18□□□□□ -0.62
PDLIM2-217ENST00000491330 HERC2O95714 4834 aa11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 IGLV5-52A0A0A0MRZ9 124 aa11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 SMIM17P0DL12 118 aa11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 GCSHP23434 173 aa11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 SPANXN1Q5VSR9 72 aa11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 LYPD6BQ8NI32 183 aa11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
PDLIM2-217ENST00000491330 DNAH17Q9UFH2 4485 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 A0A087WWL8 130 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 A0A087WX48 190 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 SNAI2O43623 268 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 UFSP1Q6NVU6 142 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 MED9Q9NWA0 146 aa11.16□□□□□ -0.62
PDLIM2-217ENST00000491330 PRR27Q6MZM9 219 aa11.15□□□□□ -0.62
PDLIM2-217ENST00000491330 SAMD10Q9BYL1 202 aa11.15□□□□□ -0.62
PDLIM2-217ENST00000491330 JPT2Q9H910 190 aa11.15□□□□□ -0.62
PDLIM2-217ENST00000491330 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.63
PDLIM2-217ENST00000491330 RAB4BP61018 213 aa11.14□□□□□ -0.63
PDLIM2-217ENST00000491330 PKIAP61925 76 aa11.14□□□□□ -0.63
PDLIM2-217ENST00000491330 ZNF56Q15929 161 aa11.14□□□□□ -0.63
PDLIM2-217ENST00000491330 ALKAL2Q6UX46 152 aa11.14□□□□□ -0.63
PDLIM2-217ENST00000491330 CHCHD7Q9BUK0 85 aa11.14□□□□□ -0.63
PDLIM2-217ENST00000491330 TRBV7-3A0A075B6L6 115 aa11.13□□□□□ -0.63
PDLIM2-217ENST00000491330 EPM2AB3EWF7 344 aa11.13□□□□□ -0.63
PDLIM2-217ENST00000491330 F5H697 171 aa11.13□□□□□ -0.63
PDLIM2-217ENST00000491330 Q6ZSN1 163 aa11.13□□□□□ -0.63
PDLIM2-217ENST00000491330 C14orf178Q8N769 122 aaPredicted RBP11.13□□□□□ -0.63
PDLIM2-217ENST00000491330 FRZBQ92765 325 aa11.13□□□□□ -0.63
PDLIM2-217ENST00000491330 DERL1Q9BUN8 251 aa11.13□□□□□ -0.63
PDLIM2-217ENST00000491330 C19orf71A6NCJ1 209 aa11.12□□□□□ -0.63
PDLIM2-217ENST00000491330 F2Z2F3 143 aa11.12□□□□□ -0.63
PDLIM2-217ENST00000491330 IGLV2-8P01709 118 aa11.12□□□□□ -0.63
PDLIM2-217ENST00000491330 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
PDLIM2-217ENST00000491330 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
PDLIM2-217ENST00000491330 RBFOX3A6NFN3 312 aa11.11□□□□□ -0.63
PDLIM2-217ENST00000491330 TMEM262E9PQX1 116 aa11.11□□□□□ -0.63
PDLIM2-217ENST00000491330 P01737 135 aa11.11□□□□□ -0.63
PDLIM2-217ENST00000491330 CACNG7P62955 275 aa11.11□□□□□ -0.63
PDLIM2-217ENST00000491330 Q8N814 137 aa11.11□□□□□ -0.63
PDLIM2-217ENST00000491330 DNAH11Q96DT5 4516 aa11.1□□□□□ -0.63
PDLIM2-217ENST00000491330 Q0VG73 95 aa11.1□□□□□ -0.63
PDLIM2-217ENST00000491330 AP1S3Q96PC3 154 aa11.1□□□□□ -0.63
PDLIM2-217ENST00000491330 H7C1H1 209 aa11.09□□□□□ -0.63
PDLIM2-217ENST00000491330 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
PDLIM2-217ENST00000491330 WDR73Q6P4I2 378 aa11.09□□□□□ -0.63
PDLIM2-217ENST00000491330 FER1L6-AS1Q8NA97 138 aa11.09□□□□□ -0.63
PDLIM2-217ENST00000491330 OR2D3Q8NGH3 330 aa11.09□□□□□ -0.63
PDLIM2-217ENST00000491330 OR10G8Q8NGN5 311 aa11.09□□□□□ -0.63
PDLIM2-217ENST00000491330 TRBV20OR9-2A0A075B6H5 130 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 FAM229AH3BQW9 127 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 CRPP02741 224 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 IGLC6P0CF74 106 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 DAZ4Q86SG3 579 aaKnown RBP11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 NIT1Q86X76 327 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 OR10AG1Q8NH19 301 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 TMEM70Q9BUB7 260 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 TPPP3Q9BW30 176 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms