RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	ZNF876P	Q49A33	203 aa		12.99	□□□□□ -0.33
SRM-206	ENST00000490101	TRGC1	P0CF51	173 aa		12.98	□□□□□ -0.33
SRM-206	ENST00000490101	MIF	P14174	115 aa		12.98	□□□□□ -0.33
SRM-206	ENST00000490101	RAB4B	P61018	213 aa		12.98	□□□□□ -0.33
SRM-206	ENST00000490101	NDUFAF3	Q9BU61	184 aa		12.98	□□□□□ -0.33
SRM-206	ENST00000490101	TMEM191A	Q9H0A3	160 aa		12.98	□□□□□ -0.33
SRM-206	ENST00000490101	SMIM15	Q7Z3B0	74 aa		12.97	□□□□□ -0.33
SRM-206	ENST00000490101	TRAPPC1	Q9Y5R8	145 aa		12.97	□□□□□ -0.33
SRM-206	ENST00000490101	LGALS9B	Q3B8N2	356 aa		12.96	□□□□□ -0.33
SRM-206	ENST00000490101	LINC00476	Q8WZB0	136 aa		12.96	□□□□□ -0.33
SRM-206	ENST00000490101	RASL10A	Q92737	203 aa		12.96	□□□□□ -0.33
SRM-206	ENST00000490101	AP1S3	Q96PC3	154 aa		12.96	□□□□□ -0.33
SRM-206	ENST00000490101	IGHV4-28	A0A0C4DH34	117 aa		12.95	□□□□□ -0.34
SRM-206	ENST00000490101	LY6G6C	O95867	125 aa		12.95	□□□□□ -0.34
SRM-206	ENST00000490101	EVI2A	P22794	236 aa		12.95	□□□□□ -0.34
SRM-206	ENST00000490101	FAM104B	Q5XKR9	115 aa		12.95	□□□□□ -0.34
SRM-206	ENST00000490101		Q8NAQ8	132 aa		12.95	□□□□□ -0.34
SRM-206	ENST00000490101	MRPL18	Q9H0U6	180 aa	Known RBP	12.95	□□□□□ -0.34
SRM-206	ENST00000490101	NOP10	Q9NPE3	64 aa	Known RBP	12.95	□□□□□ -0.34
SRM-206	ENST00000490101	APCS	P02743	223 aa		12.94	□□□□□ -0.34
SRM-206	ENST00000490101	TRGC2	P03986	189 aa		12.94	□□□□□ -0.34
SRM-206	ENST00000490101	MRPL16	Q9NX20	251 aa	Known RBP	12.94	□□□□□ -0.34
SRM-206	ENST00000490101	KIF25-AS1	Q9Y6Z4	181 aa		12.94	□□□□□ -0.34
SRM-206	ENST00000490101		A8MWV9	139 aa		12.93	□□□□□ -0.34
SRM-206	ENST00000490101	PHOX2A	O14813	284 aa		12.93	□□□□□ -0.34
SRM-206	ENST00000490101	FABP9	Q0Z7S8	132 aa		12.93	□□□□□ -0.34
SRM-206	ENST00000490101	SLA	Q13239	276 aa		12.93	□□□□□ -0.34
SRM-206	ENST00000490101	FRZB	Q92765	325 aa		12.93	□□□□□ -0.34
SRM-206	ENST00000490101	DPH3P1	Q9H4G8	78 aa		12.93	□□□□□ -0.34
SRM-206	ENST00000490101	JPT2	Q9H910	190 aa		12.93	□□□□□ -0.34
SRM-206	ENST00000490101	TRGV1	A0A0A0MS02	117 aa		12.92	□□□□□ -0.34
SRM-206	ENST00000490101	NUPR2	A6NF83	97 aa		12.92	□□□□□ -0.34
SRM-206	ENST00000490101		Q6ZTI0	123 aa		12.92	□□□□□ -0.34
SRM-206	ENST00000490101	AMN1	Q8IY45	258 aa		12.92	□□□□□ -0.34
SRM-206	ENST00000490101	C14orf178	Q8N769	122 aa	Predicted RBP	12.92	□□□□□ -0.34
SRM-206	ENST00000490101	RNF185	Q96GF1	192 aa		12.92	□□□□□ -0.34
SRM-206	ENST00000490101	LYRM9	A8MSI8	78 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	RS1	O15537	224 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	CRYGD	P07320	174 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	RAB4A	P20338	218 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	EMP1	P54849	157 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	LINC00315	P59091	139 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	LINC00612	Q8N6U2	182 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	FRAS1	Q86XX4	4008 aa		12.91	□□□□□ -0.34
SRM-206	ENST00000490101	C1orf196	B1AJZ1	125 aa		12.9	□□□□□ -0.34
SRM-206	ENST00000490101	SMIM17	P0DL12	118 aa		12.9	□□□□□ -0.34
SRM-206	ENST00000490101	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.9	□□□□□ -0.34
SRM-206	ENST00000490101	POM121L12	Q8N7R1	296 aa		12.9	□□□□□ -0.34
SRM-206	ENST00000490101	SAMD10	Q9BYL1	202 aa		12.9	□□□□□ -0.34
SRM-206	ENST00000490101	MRPL51	Q4U2R6	128 aa	Known RBP	12.89	□□□□□ -0.35
SRM-206	ENST00000490101	CFAP126	Q5VTH2	177 aa		12.89	□□□□□ -0.35
SRM-206	ENST00000490101		A0A087WWL8	130 aa		12.88	□□□□□ -0.35
SRM-206	ENST00000490101	RHOD	O00212	210 aa		12.88	□□□□□ -0.35
SRM-206	ENST00000490101	KIAA1644	Q3SXP7	199 aa		12.88	□□□□□ -0.35
SRM-206	ENST00000490101	UFSP1	Q6NVU6	142 aa		12.88	□□□□□ -0.35
SRM-206	ENST00000490101	C18orf15	Q96N68	181 aa		12.88	□□□□□ -0.35
SRM-206	ENST00000490101	C11orf68	Q9H3H3	251 aa	Known RBP	12.88	□□□□□ -0.35
SRM-206	ENST00000490101	DKK2	Q9UBU2	259 aa		12.88	□□□□□ -0.35
SRM-206	ENST00000490101	TRAV4	A0A0B4J268	109 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	GAGE12B	A1L429	117 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	DEFB4A	O15263	64 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	GAGE7	O76087	117 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	PPBP	P02775	128 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	GAGE12F	P0CL80	117 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	GAGE12G	P0CL81	117 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	GAGE12I	P0CL82	117 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	FAM222A	Q5U5X8	452 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	ZFP2	Q6ZN57	461 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	MRAP2	Q96G30	205 aa		12.87	□□□□□ -0.35
SRM-206	ENST00000490101	KLK5	Q9Y337	293 aa	Predicted RBP	12.87	□□□□□ -0.35
SRM-206	ENST00000490101	KMT2A	Q03164	3969 aa		12.86	□□□□□ -0.35
SRM-206	ENST00000490101	TEX48	A0A1B0GUV7	120 aa		12.86	□□□□□ -0.35
SRM-206	ENST00000490101	CIDEA	O60543	219 aa		12.86	□□□□□ -0.35
SRM-206	ENST00000490101	MGP	P08493	103 aa		12.86	□□□□□ -0.35
SRM-206	ENST00000490101	OR4C5	Q8NGB2	326 aa		12.86	□□□□□ -0.35
SRM-206	ENST00000490101	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.86	□□□□□ -0.35
SRM-206	ENST00000490101	TRGV2	A0A075B6R0	118 aa		12.85	□□□□□ -0.35
SRM-206	ENST00000490101	SPART-AS1	P0CW21	52 aa		12.85	□□□□□ -0.35
SRM-206	ENST00000490101	CKS2	P33552	79 aa		12.85	□□□□□ -0.35
SRM-206	ENST00000490101	RAB5B	P61020	215 aa		12.85	□□□□□ -0.35
SRM-206	ENST00000490101	FAM74A4	Q5TZK3	123 aa		12.85	□□□□□ -0.35
SRM-206	ENST00000490101	DNAH10	Q8IVF4	4471 aa		12.85	□□□□□ -0.35
SRM-206	ENST00000490101	NACA	E9PAV3	2078 aa		12.85	□□□□□ -0.35
SRM-206	ENST00000490101		D6R8Y8	96 aa		12.84	□□□□□ -0.35
SRM-206	ENST00000490101	ORMDL3	Q8N138	153 aa		12.84	□□□□□ -0.35
SRM-206	ENST00000490101	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.84	□□□□□ -0.35
SRM-206	ENST00000490101		F5H697	171 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST1H2BK	O60814	126 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST1H2BJ	P06899	126 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	DEFB130B	P0DP73	79 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	DEFB130A	P0DP74	79 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST1H2BO	P23527	126 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	SRI	P30626	198 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST1H2BB	P33778	126 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST1H2BD	P58876	126 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST1H2BC	P62807	126 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST2H2BE	Q16778	126 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.83	□□□□□ -0.36
SRM-206	ENST00000490101	SUMO4	Q6EEV6	95 aa		12.83	□□□□□ -0.36
SRM-206	ENST00000490101	HIST1H2BH	Q93079	126 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms