RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 H3BVH4 76 aa8.96□□□□□ -0.98
VARS-227ENST00000489979 PRSS1P07477 247 aa8.96□□□□□ -0.98
VARS-227ENST00000489979 IL36BQ9NZH7 164 aa8.96□□□□□ -0.98
VARS-227ENST00000489979 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
VARS-227ENST00000489979 A0A087WWL8 130 aa8.95□□□□□ -0.98
VARS-227ENST00000489979 HLA-DQA1P01909 254 aa8.95□□□□□ -0.98
VARS-227ENST00000489979 CRPP02741 224 aa8.95□□□□□ -0.98
VARS-227ENST00000489979 RPL12P30050 165 aaKnown RBP8.95□□□□□ -0.98
VARS-227ENST00000489979 SUMO1P63165 101 aaKnown RBP8.95□□□□□ -0.98
VARS-227ENST00000489979 SAPCD1Q5SSQ6 148 aa8.95□□□□□ -0.98
VARS-227ENST00000489979 DGAT2L7PQ6IED9 249 aa8.95□□□□□ -0.98
VARS-227ENST00000489979 C15orf54Q8N8G6 183 aa8.95□□□□□ -0.98
VARS-227ENST00000489979 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
VARS-227ENST00000489979 FABP5P3A8MUU1 101 aa8.94□□□□□ -0.98
VARS-227ENST00000489979 STAG3L2P0CL84 134 aa8.94□□□□□ -0.98
VARS-227ENST00000489979 STAG3L3P0CL85 134 aa8.94□□□□□ -0.98
VARS-227ENST00000489979 GCHFRP30047 84 aa8.94□□□□□ -0.98
VARS-227ENST00000489979 CDC34P49427 236 aaPredicted RBP8.94□□□□□ -0.98
VARS-227ENST00000489979 H2BFSP57053 126 aa8.94□□□□□ -0.98
VARS-227ENST00000489979 SUN5Q8TC36 379 aa8.94□□□□□ -0.98
VARS-227ENST00000489979 ZC2HC1AQ96GY0 325 aa8.94□□□□□ -0.98
VARS-227ENST00000489979 TRAV34A0A0B4J273 112 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 A0A0D9SG52 128 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 B4DEV8 164 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 MPC2O95563 127 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 ARMS2P0C7Q2 107 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 UBE2D3P61077 147 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 UBE2D2P62837 147 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 RPL36AP83881 106 aaKnown RBP8.93□□□□□ -0.98
VARS-227ENST00000489979 MPV17L2Q567V2 206 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 OR11H4Q8NGC9 324 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 RPL36ALQ969Q0 106 aaKnown RBP8.93□□□□□ -0.98
VARS-227ENST00000489979 MED28Q9H204 178 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 ALG5Q9Y673 324 aa8.93□□□□□ -0.98
VARS-227ENST00000489979 TRBV7-3A0A075B6L6 115 aa8.92□□□□□ -0.98
VARS-227ENST00000489979 TRBV10-1A0A0K0K1A3 114 aa8.92□□□□□ -0.98
VARS-227ENST00000489979 ANGP03950 147 aaKnown RBP8.92□□□□□ -0.98
VARS-227ENST00000489979 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
VARS-227ENST00000489979 RAB24Q969Q5 203 aa8.92□□□□□ -0.98
VARS-227ENST00000489979 SFRP2Q96HF1 295 aa8.92□□□□□ -0.98
VARS-227ENST00000489979 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
VARS-227ENST00000489979 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
VARS-227ENST00000489979 GRIFINA4D1Z8 144 aa8.91□□□□□ -0.98
VARS-227ENST00000489979 M0R036 132 aa8.91□□□□□ -0.98
VARS-227ENST00000489979 RPL19P84098 196 aaKnown RBP8.91□□□□□ -0.98
VARS-227ENST00000489979 DNLZQ5SXM8 178 aa8.91□□□□□ -0.98
VARS-227ENST00000489979 KRBOX1C9JBD0 128 aa8.9□□□□□ -0.98
VARS-227ENST00000489979 M0R381 172 aa8.9□□□□□ -0.98
VARS-227ENST00000489979 CRIP1P50238 77 aa8.9□□□□□ -0.98
VARS-227ENST00000489979 MIAQ16674 131 aa8.9□□□□□ -0.98
VARS-227ENST00000489979 TMEM167BQ9NRX6 74 aa8.9□□□□□ -0.98
VARS-227ENST00000489979 PHLDA3Q9Y5J5 127 aa8.9□□□□□ -0.98
VARS-227ENST00000489979 OR10G8Q8NGN5 311 aa8.89□□□□□ -0.99
VARS-227ENST00000489979 CXorf1O96002 111 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 TPT1P13693 172 aaKnown RBP8.88□□□□□ -0.99
VARS-227ENST00000489979 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
VARS-227ENST00000489979 KRTAP26-1Q6PEX3 210 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 CLPSL2Q6UWE3 100 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 Q86TA4 180 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 HSD17B11Q8NBQ5 300 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 DPH3Q96FX2 82 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 CHCHD5Q9BSY4 110 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 DPH3P1Q9H4G8 78 aa8.88□□□□□ -0.99
VARS-227ENST00000489979 TMSB15BA0A087X1C1 80 aa8.87□□□□□ -0.99
VARS-227ENST00000489979 A0A1W2PRE2 83 aa8.87□□□□□ -0.99
VARS-227ENST00000489979 SH2D1AO60880 128 aa8.87□□□□□ -0.99
VARS-227ENST00000489979 ZFP82Q8N141 532 aa8.87□□□□□ -0.99
VARS-227ENST00000489979 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
VARS-227ENST00000489979 PEX7O00628 323 aa8.86□□□□□ -0.99
VARS-227ENST00000489979 IFNA7P01567 189 aa8.86□□□□□ -0.99
VARS-227ENST00000489979 PKIAP61925 76 aa8.86□□□□□ -0.99
VARS-227ENST00000489979 ODF1Q14990 250 aa8.86□□□□□ -0.99
VARS-227ENST00000489979 LINC00269Q8N2A0 174 aa8.86□□□□□ -0.99
VARS-227ENST00000489979 CLRN3Q8NCR9 226 aa8.86□□□□□ -0.99
VARS-227ENST00000489979 PRR34Q9NV39 138 aa8.86□□□□□ -0.99
VARS-227ENST00000489979 A0A087WYN8 130 aa8.85□□□□□ -0.99
VARS-227ENST00000489979 MBP02144 154 aa8.85□□□□□ -0.99
VARS-227ENST00000489979 GIPP09681 153 aaPredicted RBP8.85□□□□□ -0.99
VARS-227ENST00000489979 CHTF8P0CG12 524 aa8.85□□□□□ -0.99
VARS-227ENST00000489979 ATP6V0CP27449 155 aa8.85□□□□□ -0.99
VARS-227ENST00000489979 RAB4BP61018 213 aa8.85□□□□□ -0.99
VARS-227ENST00000489979 CNBPP62633 177 aaKnown RBP8.85□□□□□ -0.99
VARS-227ENST00000489979 RBX1P62877 108 aa8.85□□□□□ -0.99
VARS-227ENST00000489979 FAM162BQ5T6X4 162 aa8.85□□□□□ -0.99
VARS-227ENST00000489979 PSMG3Q9BT73 122 aaPredicted RBP8.85□□□□□ -0.99
VARS-227ENST00000489979 ACTR3CQ9C0K3 210 aaPredicted RBP8.85□□□□□ -0.99
VARS-227ENST00000489979 hDV102S1A0JD36 115 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 PHOX2AO14813 284 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 UBE2G2P60604 165 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 GAGE6Q13070 117 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 ZNF56Q15929 161 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 NTM-AS1Q6ZSK4 140 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 RNF185Q96GF1 192 aa8.84□□□□□ -0.99
VARS-227ENST00000489979 IGLV10-54A0A075B6I4 117 aa8.83□□□□□ -1
VARS-227ENST00000489979 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
VARS-227ENST00000489979 SERF2P84101 59 aa8.83□□□□□ -1
VARS-227ENST00000489979 ZNF674Q2M3X9 581 aa8.83□□□□□ -1
VARS-227ENST00000489979 PRR27Q6MZM9 219 aa8.83□□□□□ -1
VARS-227ENST00000489979 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms