RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 XKRY2A2RUG3 117 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 F5H697 171 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 SSTP61278 116 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 DNLZQ5SXM8 178 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 DMRTA1Q5VZB9 504 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 TPPP3Q9BW30 176 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 Q9HAA7 133 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 BIN3Q9NQY0 253 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 MED9Q9NWA0 146 aa6.22□□□□□ -1.41
HDAC6-232ENST00000489053 TRAV1-1A0A0B4J248 108 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 IGHV3-30P01768 117 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 IGHV3-33P01772 117 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 IGHV3-30-3P0DP02 117 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 IGHV3-30-5P0DP03 117 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 TAGLN2P37802 199 aaKnown RBP6.21□□□□□ -1.42
HDAC6-232ENST00000489053 SULT1A2P50226 295 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 RPS20P60866 119 aaKnown RBP6.21□□□□□ -1.42
HDAC6-232ENST00000489053 RPL36AP83881 106 aaKnown RBP6.21□□□□□ -1.42
HDAC6-232ENST00000489053 MEF2BQ02080 365 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-232ENST00000489053 CENPWQ5EE01 88 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 LINC01556Q5JQF7 62 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 TOR2AQ5JU69 321 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 RPL36ALQ969Q0 106 aaKnown RBP6.21□□□□□ -1.42
HDAC6-232ENST00000489053 SFRP2Q96HF1 295 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 JPT2Q9H910 190 aa6.21□□□□□ -1.42
HDAC6-232ENST00000489053 P01737 135 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 BCL2P10415 239 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 CCL20P78556 96 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 RPL19P84098 196 aaKnown RBP6.2□□□□□ -1.42
HDAC6-232ENST00000489053 Q6ZNX1 250 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-232ENST00000489053 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 TM2D2Q9BX73 214 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 KIAA1109Q2LD37 5005 aa6.2□□□□□ -1.42
HDAC6-232ENST00000489053 A0A087WX48 190 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 CXCL1P09341 107 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 BLOC1S1P78537 153 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 CDPF1Q6NVV7 123 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 Q6ZSN1 163 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 OR2D3Q8NGH3 330 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 OR10AG1Q8NH19 301 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 C11orf52Q96A22 123 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 RMI2Q96E14 147 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 DERL1Q9BUN8 251 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 SCRT2Q9NQ03 307 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 VAX2Q9UIW0 290 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 TNFRSF18Q9Y5U5 241 aa6.19□□□□□ -1.42
HDAC6-232ENST00000489053 TRAV8-3A0A0A6YYJ7 113 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 MUC21A0A0G2JKD1 596 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 MUC21A0A140T8X8 626 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 MGPP08493 103 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 OR5AL1P0C617 328 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 RAB4BP61018 213 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 ELOBQ15370 118 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 FER1L6-AS1Q8NA97 138 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 SMIM12Q96EX1 92 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 MLST8Q9BVC4 326 aa6.18□□□□□ -1.42
HDAC6-232ENST00000489053 TRBV7-3A0A075B6L6 115 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 A0A087WTM6 91 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 RAB19A4D1S5 217 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 IBA57-AS1B1ANH7 110 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 TMEM262E9PQX1 116 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 H7C1H1 209 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 CDK2AP2O75956 126 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 CEBPGP53567 150 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 KRTAP10-2P60368 255 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 PKIAP61925 76 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 CACNG7P62955 275 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 LAGE3Q14657 143 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 UFSP1Q6NVU6 142 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 ALKAL2Q6UX46 152 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
HDAC6-232ENST00000489053 C9orf62Q8N4C0 152 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 MAPKAPK5-AS1Q8N8E1 139 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 COX11Q9Y6N1 276 aa6.17□□□□□ -1.42
HDAC6-232ENST00000489053 IGLV5-52A0A0A0MRZ9 124 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 SNAI2O43623 268 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 CRPP02741 224 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 GZMBP10144 247 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 TMEM97Q5BJF2 176 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 SMIM15Q7Z3B0 74 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 DNAH5Q8TE73 4624 aa6.16□□□□□ -1.42
HDAC6-232ENST00000489053 RBFOX3A6NFN3 312 aa6.15□□□□□ -1.42
HDAC6-232ENST00000489053 F2Z2F3 143 aa6.15□□□□□ -1.42
HDAC6-232ENST00000489053 TRGC1P0CF51 173 aa6.15□□□□□ -1.42
HDAC6-232ENST00000489053 CHCHD5Q9BSY4 110 aa6.15□□□□□ -1.42
HDAC6-232ENST00000489053 EIF5A2Q9GZV4 153 aaKnown RBP6.15□□□□□ -1.42
HDAC6-232ENST00000489053 IGKV2D-24A0A075B6R9 120 aa6.14□□□□□ -1.43
HDAC6-232ENST00000489053 LINC00694P0DN24 101 aa6.14□□□□□ -1.43
HDAC6-232ENST00000489053 UBE2D3P61077 147 aa6.14□□□□□ -1.43
HDAC6-232ENST00000489053 UBE2D2P62837 147 aa6.14□□□□□ -1.43
HDAC6-232ENST00000489053 DAZ4Q86SG3 579 aaKnown RBP6.14□□□□□ -1.43
HDAC6-232ENST00000489053 OR10G8Q8NGN5 311 aa6.14□□□□□ -1.43
HDAC6-232ENST00000489053 NTN5Q8WTR8 489 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-232ENST00000489053 UBE2WQ96B02 151 aa6.14□□□□□ -1.43
HDAC6-232ENST00000489053 BORCS7Q96B45 105 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms