RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ANAPC1Q9H1A4 1944 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 LRP5O75197 1615 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 TEX49A0A1B0GTD5 131 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 M0R143 59 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 SPINK8P0C7L1 97 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 CYP2G1PQ6ZSU1 146 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 SPTSSBQ8NFR3 76 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 PPP1R1CQ8WVI7 109 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 IFI27L1Q96BM0 104 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 OBSCN-AS1Q96MR7 158 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 AQP10Q96PS8 301 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 CDK5RAP2Q96SN8 1893 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 VPS8Q8N3P4 1428 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 MYH10P35580 1976 aa1.05□□□□□ -2.24
HMGB1P36-201ENST00000487709 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 SPEF2Q9C093 1822 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 TRAV12-3A0A0B4J271 114 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 TRBV10-3A0A0K0K1G6 114 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 OOSP1A8MZH6 123 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 TFF1P04155 84 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 FXYD4P59646 89 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 RBM3P98179 157 aaKnown RBP1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 Q8N8P6 123 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 CNTLNQ9NXG0 1405 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 IFT140Q96RY7 1462 aa1.04□□□□□ -2.24
HMGB1P36-201ENST00000487709 UBE2L5PA0A1B0GUS4 154 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 SSSCA1O60232 199 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 ATP5EP56381 51 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 UBE2L3P68036 154 aaKnown RBP1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 CCL8P80075 99 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 INSL4Q14641 139 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 XAF1Q6GPH4 301 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 C5orf38Q86SI9 138 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 TTC9CQ8N5M4 171 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 DSCR8Q96T75 97 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 AMELYQ99218 206 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 PTPRMP28827 1452 aa1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 CDK12Q9NYV4 1490 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P36-201ENST00000487709 KIAA1549LQ6ZVL6 1849 aa1.03□□□□□ -2.25
HMGB1P36-201ENST00000487709 CACNA1BQ00975 2339 aa1.03□□□□□ -2.25
HMGB1P36-201ENST00000487709 TRAV13-2A0A0B4J235 113 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 LOC101927531A0A1B0GV80 90 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 S100A10P60903 97 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 PKIAP61925 76 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 DCDP81605 110 aaKnown RBP1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 Q6ZQY7 126 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 ZNF818PQ6ZRF7 136 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 DEFB132Q7Z7B7 95 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 SBSPONQ8IVN8 264 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 C10orf82Q8WW14 230 aa1.02□□□□□ -2.25
HMGB1P36-201ENST00000487709 NRKQ7Z2Y5 1582 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 CPSF1Q10570 1443 aaKnown RBP1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 TMEM262E9PQX1 116 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 NCR3O14931 201 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 FXYD3Q14802 87 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 NCMAPQ5T1S8 102 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 COMMD6Q7Z4G1 85 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 CYP4F30PQ9H0H9 118 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 DLG5Q8TDM6 1919 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 FOCADQ5VW36 1801 aa1.01□□□□□ -2.25
HMGB1P36-201ENST00000487709 CUL7Q14999 1698 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 KDM6BO15054 1643 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 ROS1P08922 2347 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 ZFYVE16Q7Z3T8 1539 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 NCOA6Q14686 2063 aaPredicted RBP1□□□□□ -2.25
HMGB1P36-201ENST00000487709 FANCMQ8IYD8 2048 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 EXPH5Q8NEV8 1989 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 HCG22E2RYF7 251 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 H3BQ15 152 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 SIX6O95475 246 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 UBE2D1P51668 147 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 CAV3P56539 151 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 SSBP1Q04837 148 aaKnown RBP1□□□□□ -2.25
HMGB1P36-201ENST00000487709 ZNF56Q15929 161 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 COL5A1-AS1Q5SY13 56 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 FAM74A4Q5TZK3 123 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 MYOZ3Q8TDC0 251 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 DPH3P1Q9H4G8 78 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 BET1LQ9NYM9 111 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 AP4S1Q9Y587 144 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 QRICH2Q9H0J4 1663 aa1□□□□□ -2.25
HMGB1P36-201ENST00000487709 BLMP54132 1417 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 TRBV7-1A0A0A6YYK4 115 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 NBDYA0A0U1RRE5 68 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 RBAKDNA6NC62 111 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 FXYD1O00168 92 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 FREM3P0C091 2139 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 LINC00032P0C843 101 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 CCL3L1P16619 93 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 LINC00575Q6W349 94 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 Q86TA4 180 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 C20orf197Q8N268 126 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 C5orf56Q8N8D9 126 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 COX7B2Q8TF08 81 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 CCL19Q99731 98 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 LINC00312Q9Y6C7 94 aa0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 HELZP42694 1942 aaKnown RBP0.99□□□□□ -2.25
HMGB1P36-201ENST00000487709 C10orf71Q711Q0 1435 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms