RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 C3orf56Q8N813 242 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 IL17DQ8TAD2 202 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 TMEM158Q8WZ71 300 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 IGHV1-24A0A0C4DH33 117 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 PRSS47A8MTI9 375 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 JOSD1Q15040 202 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-211ENST00000487698 ZNF876PQ49A33 203 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 C1QTNF4Q9BXJ3 329 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 MAP1LC3AQ9H492 121 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 M0R2P5 195 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 CRYGDP07320 174 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 MGPP08493 103 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 AZU1P20160 251 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 PRSS3P2Q8NHM4 247 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
SF3B1-211ENST00000487698 RASL10AQ92737 203 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 TMEM208Q9BTX3 173 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 CMYA5Q8N3K9 4069 aa6.84□□□□□ -1.31
SF3B1-211ENST00000487698 IGLV2-18A0A075B6J9 118 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 A0A087WWL8 130 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 LOC389332A0A1B0GUA5 103 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 SMIM17P0DL12 118 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 C12orf54Q6X4T0 127 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 ZNF705AQ6ZN79 300 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-211ENST00000487698 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 SPXQ9BT56 116 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 A0A096LNJ9 63 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 TMEM263Q8WUH6 116 aaKnown RBP6.83□□□□□ -1.32
SF3B1-211ENST00000487698 NXT2Q9NPJ8 142 aaKnown RBP6.83□□□□□ -1.32
SF3B1-211ENST00000487698 GOLT1BQ9Y3E0 138 aa6.83□□□□□ -1.32
SF3B1-211ENST00000487698 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 SUMO4Q6EEV6 95 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 UFSP1Q6NVU6 142 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 NDUFAF3Q9BU61 184 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 PKD1L1Q8TDX9 2849 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 Q8N8P6 123 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
SF3B1-211ENST00000487698 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
SF3B1-211ENST00000487698 ANK2Q01484 3957 aa6.81□□□□□ -1.32
SF3B1-211ENST00000487698 PLAC8L1A1L4L8 177 aa6.81□□□□□ -1.32
SF3B1-211ENST00000487698 A8MWV9 139 aa6.81□□□□□ -1.32
SF3B1-211ENST00000487698 PPP1R17O96001 155 aa6.81□□□□□ -1.32
SF3B1-211ENST00000487698 FAM74A4Q5TZK3 123 aa6.81□□□□□ -1.32
SF3B1-211ENST00000487698 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
SF3B1-211ENST00000487698 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
SF3B1-211ENST00000487698 Q8N976 141 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 EDA2RQ9HAV5 297 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 NIT2Q9NQR4 276 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 MRPL16Q9NX20 251 aaKnown RBP6.8□□□□□ -1.32
SF3B1-211ENST00000487698 M0QY20 66 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 LEPROTL1O95214 131 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 KRTDAPP60985 99 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 RPL32P62910 135 aaKnown RBP6.8□□□□□ -1.32
SF3B1-211ENST00000487698 ZNF56Q15929 161 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 C16orf74Q96GX8 76 aa6.8□□□□□ -1.32
SF3B1-211ENST00000487698 KIR2DL5BA0A0G2JN68 375 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 KIR2DL5BA0A0G2JPC4 375 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 TRBV6-5A0A0K0K1A5 114 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 F5H697 171 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 RS1O15537 224 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 EGFEM1PQ0D2K5 195 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 DAZ2Q13117 558 aaKnown RBP6.79□□□□□ -1.32
SF3B1-211ENST00000487698 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-211ENST00000487698 KIR2DL5AQ8N109 375 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 KIR2DL5BQ8NHK3 375 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 HBDP02042 147 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 LGALS9BQ3B8N2 356 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
SF3B1-211ENST00000487698 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
SF3B1-211ENST00000487698 RHODO00212 210 aa6.78□□□□□ -1.32
SF3B1-211ENST00000487698 SCGB1D1O95968 90 aa6.78□□□□□ -1.32
SF3B1-211ENST00000487698 BTF3P20290 206 aaKnown RBP6.78□□□□□ -1.32
SF3B1-211ENST00000487698 POLR2KP53803 58 aaKnown RBP6.78□□□□□ -1.32
SF3B1-211ENST00000487698 KRTAP10-11P60412 298 aa6.78□□□□□ -1.32
SF3B1-211ENST00000487698 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
SF3B1-211ENST00000487698 K7EMI3 77 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 FCER1GP30273 86 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 ZFP2Q6ZN57 461 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 Q6ZTI0 123 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 OVOL2Q9BRP0 275 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 TMEM70Q9BUB7 260 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 ST20Q9HBF5 79 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 HSPB8Q9UJY1 196 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 TRGV1A0A0A0MS02 117 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 TCAPO15273 167 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 APOC4P55056 127 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 LAGE3Q14657 143 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 SPATA12Q7Z6I5 190 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 NOP10Q9NPE3 64 aaKnown RBP6.77□□□□□ -1.33
SF3B1-211ENST00000487698 X6R8D5 127 aa6.77□□□□□ -1.33
SF3B1-211ENST00000487698 IGHV3-73A0A0B4J1V6 119 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 TRBV27A0A0K0K1C4 114 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms