RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TRAV8-3A0A0A6YYJ7 113 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 LRCOL1A6NCL2 159 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 RNF222A6NCQ9 220 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 M0R036 132 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 HAMPP81172 84 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 FAM74A4Q5TZK3 123 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 KCNIP4Q6PIL6 250 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 STOML3Q8TAV4 291 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 FMC1Q96HJ9 113 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 TMEM70Q9BUB7 260 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 ZFP30Q9Y2G7 519 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 PHLDA3Q9Y5J5 127 aa8.86□□□□□ -0.99
UBA3-210ENST00000485424 MAP1LC3B2A6NCE7 125 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 FAM74A7A6NL05 159 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 SEC11BP0C7V7 166 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 TPT1P13693 172 aaKnown RBP8.85□□□□□ -0.99
UBA3-210ENST00000485424 ZNF726P1Q15940 193 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 FAM162BQ5T6X4 162 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 RMI2Q96E14 147 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 MAP1LC3BQ9GZQ8 125 aa8.85□□□□□ -0.99
UBA3-210ENST00000485424 ARPC5O15511 151 aa8.84□□□□□ -0.99
UBA3-210ENST00000485424 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
UBA3-210ENST00000485424 AKR1C3P42330 323 aa8.84□□□□□ -0.99
UBA3-210ENST00000485424 JPT2Q9H910 190 aa8.84□□□□□ -0.99
UBA3-210ENST00000485424 COX11Q9Y6N1 276 aa8.84□□□□□ -0.99
UBA3-210ENST00000485424 GRIFINA4D1Z8 144 aa8.83□□□□□ -1
UBA3-210ENST00000485424 KRBOX1C9JBD0 128 aa8.83□□□□□ -1
UBA3-210ENST00000485424 M0R381 172 aa8.83□□□□□ -1
UBA3-210ENST00000485424 SH2D1AO60880 128 aa8.83□□□□□ -1
UBA3-210ENST00000485424 Q6ZSN1 163 aa8.83□□□□□ -1
UBA3-210ENST00000485424 C14orf178Q8N769 122 aaPredicted RBP8.83□□□□□ -1
UBA3-210ENST00000485424 ZC2HC1AQ96GY0 325 aa8.83□□□□□ -1
UBA3-210ENST00000485424 SAMD10Q9BYL1 202 aa8.83□□□□□ -1
UBA3-210ENST00000485424 TMSB15BA0A087X1C1 80 aa8.82□□□□□ -1
UBA3-210ENST00000485424 DNLZQ5SXM8 178 aa8.82□□□□□ -1
UBA3-210ENST00000485424 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
UBA3-210ENST00000485424 ZFP82Q8N141 532 aa8.82□□□□□ -1
UBA3-210ENST00000485424 TCEAL7Q9BRU2 100 aa8.82□□□□□ -1
UBA3-210ENST00000485424 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
UBA3-210ENST00000485424 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.81□□□□□ -1
UBA3-210ENST00000485424 A0A087WWL8 130 aa8.81□□□□□ -1
UBA3-210ENST00000485424 A0A087WX48 190 aa8.81□□□□□ -1
UBA3-210ENST00000485424 RPL36AP83881 106 aaKnown RBP8.81□□□□□ -1
UBA3-210ENST00000485424 ELOBQ15370 118 aa8.81□□□□□ -1
UBA3-210ENST00000485424 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.81□□□□□ -1
UBA3-210ENST00000485424 RPL36ALQ969Q0 106 aaKnown RBP8.81□□□□□ -1
UBA3-210ENST00000485424 SFRP2Q96HF1 295 aa8.81□□□□□ -1
UBA3-210ENST00000485424 IGKV2D-24A0A075B6R9 120 aa8.8□□□□□ -1
UBA3-210ENST00000485424 LECT2O14960 151 aa8.8□□□□□ -1
UBA3-210ENST00000485424 PFDN1O60925 122 aa8.8□□□□□ -1
UBA3-210ENST00000485424 LINC00694P0DN24 101 aa8.8□□□□□ -1
UBA3-210ENST00000485424 FHITP49789 147 aa8.8□□□□□ -1
UBA3-210ENST00000485424 CRIP1P50238 77 aa8.8□□□□□ -1
UBA3-210ENST00000485424 RGS21Q2M5E4 152 aa8.8□□□□□ -1
UBA3-210ENST00000485424 LTAP01374 205 aa8.79□□□□□ -1
UBA3-210ENST00000485424 C1QBP02746 253 aa8.79□□□□□ -1
UBA3-210ENST00000485424 ZNF56Q15929 161 aa8.79□□□□□ -1
UBA3-210ENST00000485424 ZNF674Q2M3X9 581 aa8.79□□□□□ -1
UBA3-210ENST00000485424 UFSP1Q6NVU6 142 aa8.79□□□□□ -1
UBA3-210ENST00000485424 KLK12Q9UKR0 248 aa8.79□□□□□ -1
UBA3-210ENST00000485424 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
UBA3-210ENST00000485424 TRBV6-1A0A0K0K1D8 114 aa8.78□□□□□ -1
UBA3-210ENST00000485424 RBFOX3A6NFN3 312 aa8.78□□□□□ -1
UBA3-210ENST00000485424 PAGE4O60829 102 aa8.78□□□□□ -1
UBA3-210ENST00000485424 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
UBA3-210ENST00000485424 S100A9P06702 114 aaKnown RBP8.78□□□□□ -1
UBA3-210ENST00000485424 COX8CQ7Z4L0 72 aa8.78□□□□□ -1
UBA3-210ENST00000485424 NIT1Q86X76 327 aa8.78□□□□□ -1
UBA3-210ENST00000485424 BAALCQ8WXS3 180 aa8.78□□□□□ -1
UBA3-210ENST00000485424 Q9UF83 564 aa8.78□□□□□ -1
UBA3-210ENST00000485424 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 A0A1B0GV50 99 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 TMEM262E9PQX1 116 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 Q8N976 141 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 FAM213BQ8TBF2 198 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 SFT2D1Q8WV19 159 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 CHCHD7Q9BUK0 85 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 CYTL1Q9NRR1 136 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 FAM30AQ9NZY2 134 aa8.77□□□□□ -1.01
UBA3-210ENST00000485424 LRP1Q07954 4544 aaKnown RBP8.77□□□□□ -1.01
UBA3-210ENST00000485424 KANTRA0A1W2PQU2 76 aa8.76□□□□□ -1.01
UBA3-210ENST00000485424 UMAD1C9J7I0 102 aa8.76□□□□□ -1.01
UBA3-210ENST00000485424 CRPP02741 224 aa8.76□□□□□ -1.01
UBA3-210ENST00000485424 Q0VG73 95 aa8.76□□□□□ -1.01
UBA3-210ENST00000485424 WFDC2Q14508 124 aa8.76□□□□□ -1.01
UBA3-210ENST00000485424 SPANXN1Q5VSR9 72 aa8.76□□□□□ -1.01
UBA3-210ENST00000485424 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
UBA3-210ENST00000485424 F5H697 171 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 SMLR1H3BR10 107 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 SMIM17P0DL12 118 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 RAB4BP61018 213 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 EIF5AP63241 154 aaKnown RBP8.75□□□□□ -1.01
UBA3-210ENST00000485424 ZNF345Q14585 488 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 PRR27Q6MZM9 219 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 BAGE2Q86Y30 109 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
UBA3-210ENST00000485424 G3V3Q6 166 aa8.74□□□□□ -1.01
UBA3-210ENST00000485424 UBE2D3P61077 147 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms