RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 SMIM15Q7Z3B0 74 aa7.26□□□□□ -1.25
HDAC6-226ENST00000483656 TMEM263Q8WUH6 116 aaKnown RBP7.26□□□□□ -1.25
HDAC6-226ENST00000483656 URB1-AS1Q96HZ7 61 aa7.26□□□□□ -1.25
HDAC6-226ENST00000483656 AP1S3Q96PC3 154 aa7.26□□□□□ -1.25
HDAC6-226ENST00000483656 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
HDAC6-226ENST00000483656 A0A087WWL8 130 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 TRAV26-2A0A0B4J265 109 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 IFITM10A6NMD0 228 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 NPYP01303 97 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 RRN3P1Q2M238 152 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 OR10J3Q5JRS4 329 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 PIK3CD-AS1Q5SR53 167 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 KPRPQ5T749 579 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-226ENST00000483656 ORMDL3Q8N138 153 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 MRPL16Q9NX20 251 aaKnown RBP7.25□□□□□ -1.25
HDAC6-226ENST00000483656 MGAM2Q2M2H8 2515 aa7.25□□□□□ -1.25
HDAC6-226ENST00000483656 UBE2CO00762 179 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 RS1O15537 224 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 CKS2P33552 79 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 DAZ2Q13117 558 aaKnown RBP7.24□□□□□ -1.25
HDAC6-226ENST00000483656 DEFB135Q30KP9 77 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 UFSP1Q6NVU6 142 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 HIST3H2BBQ8N257 126 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 NRACQ8N912 160 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 RASL10AQ92737 203 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 C16orf74Q96GX8 76 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 OVOL2Q9BRP0 275 aa7.24□□□□□ -1.25
HDAC6-226ENST00000483656 SMIM9A6NGZ8 99 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 SERF1AO75920 110 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 PPBPP02775 128 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 PRB2P02812 416 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-226ENST00000483656 MGPP08493 103 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 ESDP10768 282 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 CFAP126Q5VTH2 177 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 Q6ZTI0 123 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 Q6ZWC4 215 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 RNF183Q96D59 192 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 MRAP2Q96G30 205 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 NOP10Q9NPE3 64 aaKnown RBP7.23□□□□□ -1.25
HDAC6-226ENST00000483656 TGP01266 2768 aa7.23□□□□□ -1.25
HDAC6-226ENST00000483656 TRGV1A0A0A0MS02 117 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 A8MWV9 139 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 K7EIL1 84 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 TNFRSF6BO95407 300 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 SMIM17P0DL12 118 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 PDZD11Q5EBL8 140 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 SUMO4Q6EEV6 95 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 NIT1Q86X76 327 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 OR11H2Q8NH07 326 aa7.22□□□□□ -1.25
HDAC6-226ENST00000483656 PRSS47A8MTI9 375 aa7.21□□□□□ -1.26
HDAC6-226ENST00000483656 LGALS9BQ3B8N2 356 aa7.21□□□□□ -1.26
HDAC6-226ENST00000483656 FAM74A4Q5TZK3 123 aa7.21□□□□□ -1.26
HDAC6-226ENST00000483656 Q6ZSN1 163 aa7.21□□□□□ -1.26
HDAC6-226ENST00000483656 RPL39LQ96EH5 51 aaKnown RBP7.21□□□□□ -1.26
HDAC6-226ENST00000483656 NDUFAF3Q9BU61 184 aa7.21□□□□□ -1.26
HDAC6-226ENST00000483656 LAMTOR2Q9Y2Q5 125 aa7.21□□□□□ -1.26
HDAC6-226ENST00000483656 NACAE9PAV3 2078 aa7.21□□□□□ -1.26
HDAC6-226ENST00000483656 IGLV2-18A0A075B6J9 118 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 IGHV4-28A0A0C4DH34 117 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 F5H697 171 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 M0QY20 66 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 IFI27P40305 119 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-226ENST00000483656 LINC00612Q8N6U2 182 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 Q8NAQ8 132 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 RETNQ9HD89 108 aa7.2□□□□□ -1.26
HDAC6-226ENST00000483656 HUWE1Q7Z6Z7 4374 aaKnown RBP7.19□□□□□ -1.26
HDAC6-226ENST00000483656 GAGE12BA1L429 117 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 GAGE7O76087 117 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 LINC00614P0C842 121 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 GAGE12FP0CL80 117 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 GAGE12GP0CL81 117 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 GAGE12IP0CL82 117 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 EMP1P54849 157 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 ZNF56Q15929 161 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
HDAC6-226ENST00000483656 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 HIST1H2BLQ99880 126 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 MAP1LC3AQ9H492 121 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 EDA2RQ9HAV5 297 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 Q9UF83 564 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 MEGF8Q7Z7M0 2845 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
HDAC6-226ENST00000483656 TRAV4A0A0B4J268 109 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 LINC01546A6NGU7 62 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 RHODO00212 210 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 DEFB4AO15263 64 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 P0DMU3 169 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 FAM231AP0DMU4 169 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 FAM231CP0DMU5 169 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 MIFP14174 115 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 ZFP2Q6ZN57 461 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 FAM19A2Q8N3H0 131 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 Q8N8P6 123 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 OR4C5Q8NGB2 326 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 PRSS3P2Q8NHM4 247 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms