RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TMEM14BQ9NUH8 114 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 CACNG5Q9UF02 275 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 RABAC1Q9UI14 185 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 HSPB8Q9UJY1 196 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 A0A0J9YXY3 114 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 TMEM189A5PLL7 270 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 CCDC160A6NGH7 325 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 I3L2K1 104 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 CORTO00230 105 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 DEFB4AO15263 64 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 SERF1AO75920 110 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 APOMO95445 188 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 OR10J1P30954 320 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 SNCAP37840 140 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 AKR1C2P52895 323 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 PIGPP57054 158 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 DEFB131AP59861 70 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 NARS2Q96I59 477 aaKnown RBP4.5□□□□□ -1.69
CLK1-212ENST00000482590 GTSF1LQ9H1H1 148 aa4.5□□□□□ -1.69
CLK1-212ENST00000482590 DNAH2Q9P225 4427 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 MUC4Q99102 2169 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 TRAV2A0A0B4J234 112 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 TRAV10A0A0B4J240 114 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 IGHV3-66A0A0C4DH42 116 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 FAM25AB3EWG3 89 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 FAM25CB3EWG5 89 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 FAM25GB3EWG6 89 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 IGLL5B9A064 214 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 NDUFC2-KCTD14E9PQ53 114 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 GABARAPO95166 117 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 TGFBR1P36897 503 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 OPRK1P41145 380 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 DEFA1P59665 94 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 FABP9Q0Z7S8 132 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 ZNF876PQ49A33 203 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 SPINK9Q5DT21 86 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 MORN3Q6PF18 240 aaPredicted RBP4.49□□□□□ -1.69
CLK1-212ENST00000482590 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 C12orf45Q8N5I9 185 aaPredicted RBP4.49□□□□□ -1.69
CLK1-212ENST00000482590 TCEAL7Q9BRU2 100 aa4.49□□□□□ -1.69
CLK1-212ENST00000482590 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 IGLV7-46A0A075B6I9 117 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 SMIM31A0A1B0GVY4 71 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 C9orf170A2RU37 121 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 IFNA17P01571 189 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 CFC1BP0CG36 223 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 CFC1P0CG37 223 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 SMIM6P0DI80 62 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 MIFP14174 115 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 RPL7P18124 248 aaKnown RBP4.48□□□□□ -1.69
CLK1-212ENST00000482590 EIF2B2P49770 351 aaKnown RBP4.48□□□□□ -1.69
CLK1-212ENST00000482590 LSM3P62310 102 aaKnown RBP4.48□□□□□ -1.69
CLK1-212ENST00000482590 ZFP69Q49AA0 526 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 SNX29P2Q8IUI4 249 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 EXOC3-AS1Q8N2X6 119 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 OR5A1Q8NGJ0 315 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 TMEM101Q96IK0 257 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 ZNF414Q96IQ9 312 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 PAXXQ9BUH6 204 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 MED28Q9H204 178 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
CLK1-212ENST00000482590 NACAE9PAV3 2078 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 DNAH11Q96DT5 4516 aa4.48□□□□□ -1.69
CLK1-212ENST00000482590 TRAV4A0A0B4J268 109 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 EPM2AB3EWF7 344 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 M0R381 172 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 IGKV1-39P01597 117 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 IGKV1D-39P04432 117 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 ZNF688P0C7X2 276 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 NPPCP23582 126 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 HLA-DMBP28068 263 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 RHEBQ15382 184 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 SCGB2B2Q4G0G5 96 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 RNASE10Q5GAN6 216 aaKnown RBP4.47□□□□□ -1.69
CLK1-212ENST00000482590 Q8NAQ8 132 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 NUP35Q8NFH5 326 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 COMMD3Q9UBI1 195 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 APLNQ9ULZ1 77 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
CLK1-212ENST00000482590 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
CLK1-212ENST00000482590 RYR1P21817 5038 aa4.46□□□□□ -1.69
CLK1-212ENST00000482590 TRBV19A0A075B6N1 114 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 TRAV30A0A087WSZ9 112 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 C3orf85A0A1B0GTC6 90 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 INS-IGF2F8WCM5 200 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 RNASE2P10153 161 aaKnown RBP4.46□□□□□ -1.7
CLK1-212ENST00000482590 SRIP30626 198 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 ATP5G3P48201 142 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 LINC00313P59037 77 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 RRAS2P62070 204 aaPredicted RBP4.46□□□□□ -1.7
CLK1-212ENST00000482590 DHRS2Q13268 280 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 IGF2BP2-AS1Q96M15 143 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 TP53RKQ96S44 253 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 PCLOQ9Y6V0 5065 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
CLK1-212ENST00000482590 DEFB131BA0A096LNP1 70 aa4.45□□□□□ -1.7
CLK1-212ENST00000482590 C9JQL5 133 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms