RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 KIF25-AS1Q9Y6Z4 181 aa3.54□□□□□ -1.84
HDAC6-223ENST00000480525 TRAV9-1A0A075B6T8 112 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 A0A096LPF7 62 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 TRGV4A0A0C4DH28 118 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 LINC00862A6NCI5 91 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 H3BVH4 76 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 PAX4O43316 350 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 PKIAP61925 76 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 OR5I1Q13606 314 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 C10orf91Q5T1B1 145 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 DMRTA1Q5VZB9 504 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 OR2D3Q8NGH3 330 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 PCNPQ8WW12 178 aaKnown RBP3.53□□□□□ -1.84
HDAC6-223ENST00000480525 ISOC2Q96AB3 205 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 ZNF479Q96JC4 524 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 DNAJC30Q96LL9 226 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 IMMP2LQ96T52 175 aa3.53□□□□□ -1.84
HDAC6-223ENST00000480525 MRPL16Q9NX20 251 aaKnown RBP3.53□□□□□ -1.84
HDAC6-223ENST00000480525 TRBV7-3A0A075B6L6 115 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 SMIM27A0A1W2PRY6 76 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 K7EQD1 137 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 M0R036 132 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 PPP1R17O96001 155 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 S100A8P05109 93 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 SRIP30626 198 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 LINC00315P59091 139 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 ERVFC1-1P60608 527 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 RPL23P62829 140 aaKnown RBP3.52□□□□□ -1.85
HDAC6-223ENST00000480525 LAGE3Q14657 143 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 SPANXN1Q5VSR9 72 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 RASL11AQ6T310 242 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 Q6ZR54 194 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 LINC00336Q6ZUF6 198 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 ATP5L2Q7Z4Y8 100 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 DAZ4Q86SG3 579 aaKnown RBP3.52□□□□□ -1.85
HDAC6-223ENST00000480525 C10orf126Q8N4M7 172 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 SLC25A29Q8N8R3 303 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 GATD1Q8NB37 220 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 NHLRC2Q8NBF2 726 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 ZNRF2Q8NHG8 242 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 ANAPC16Q96DE5 110 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 PGLYRP4Q96LB8 373 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 SEC11CQ9BY50 192 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 DPH3P1Q9H4G8 78 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 DAZ3Q9NR90 486 aaKnown RBP3.52□□□□□ -1.85
HDAC6-223ENST00000480525 NAT8BQ9UHF3 227 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 V9GYV3 84 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 HYDINQ4G0P3 5121 aa3.52□□□□□ -1.85
HDAC6-223ENST00000480525 TRBV6-5A0A0K0K1A5 114 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 A0A1B0GUT8 65 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 C9JQL5 133 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 M0R381 172 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 GATCO43716 136 aaKnown RBP3.51□□□□□ -1.85
HDAC6-223ENST00000480525 SFTA3P0C7M3 94 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 DNAH10OSP0CZ25 163 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 SMIM17P0DL12 118 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 RPL36AP83881 106 aaKnown RBP3.51□□□□□ -1.85
HDAC6-223ENST00000480525 LINC01556Q5JQF7 62 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 LELP1Q5T871 98 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 LYPD5Q6UWN5 251 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 SMIM15Q7Z3B0 74 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.51□□□□□ -1.85
HDAC6-223ENST00000480525 OR10AG1Q8NH19 301 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 GTSF1Q8WW33 167 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 RPL36ALQ969Q0 106 aaKnown RBP3.51□□□□□ -1.85
HDAC6-223ENST00000480525 BORCS7Q96B45 105 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 BTF3L4Q96K17 158 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 CTDSP1Q9GZU7 261 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 TMEM191AQ9H0A3 160 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 GTSF1LQ9H1H1 148 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 CARHSP1Q9Y2V2 147 aaKnown RBP3.51□□□□□ -1.85
HDAC6-223ENST00000480525 RYR3Q15413 4870 aa3.51□□□□□ -1.85
HDAC6-223ENST00000480525 TRAV9-2A0A087WT02 112 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 TMEM218A2RU14 115 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 GRIFINA4D1Z8 144 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 HIGD1CA8MV81 97 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 M0QY20 66 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 PHOX2AO14813 284 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 TCAPO15273 167 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 NCR2O95944 276 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 MT-ND4LP03901 98 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 PRB4P10163 310 aaPredicted RBP3.5□□□□□ -1.85
HDAC6-223ENST00000480525 GYPEP15421 78 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 HTN3P15516 51 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 NTF3P20783 257 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 CEBPGP53567 150 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 UBE2D3P61077 147 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 UBE2D2P62837 147 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 RPL32P62910 135 aaKnown RBP3.5□□□□□ -1.85
HDAC6-223ENST00000480525 RPL19P84098 196 aaKnown RBP3.5□□□□□ -1.85
HDAC6-223ENST00000480525 SRSF3P84103 164 aaKnown RBP3.5□□□□□ -1.85
HDAC6-223ENST00000480525 ESRGQ1W209 222 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 COX19Q49B96 90 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 LYZL1Q6UWQ5 148 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 MRAP2Q96G30 205 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 RNASE7Q9H1E1 156 aaKnown RBP3.5□□□□□ -1.85
HDAC6-223ENST00000480525 LINC00588Q9Y4M8 146 aa3.5□□□□□ -1.85
HDAC6-223ENST00000480525 TRBV24-1A0A075B6N3 115 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 NBDYA0A0U1RRE5 68 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 A0A1B0GXF2 115 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms