RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 TOMM6Q96B49 74 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 TMEM141Q96I45 108 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 DEFB118Q96PH6 123 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 SLC50A1Q9BRV3 221 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 SRXN1Q9BYN0 137 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 SIRPDQ9H106 197 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 PTPRSQ13332 1948 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 IGKV1D-37A0A075B6S9 117 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3-43A0A0B4J1X8 118 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 A0A0U1RRA0 63 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 SDHAF1A6NFY7 115 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 C11orf86A6NJI1 115 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 CDX4O14627 284 aaPredicted RBP3.31□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3-9P01782 118 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 SAA2P0DJI9 122 aaPredicted RBP3.31□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3-43DP0DP04 118 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 COX6B1P14854 86 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
SSR1-207ENST00000479485 HIST1H4AP62805 103 aaKnown RBP3.31□□□□□ -1.88
SSR1-207ENST00000479485 RPL18AQ02543 176 aaKnown RBP3.31□□□□□ -1.88
SSR1-207ENST00000479485 RPL39P5Q59GN2 51 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 S100A7L2Q5SY68 101 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 PVRIGQ6DKI7 326 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 ASCL5Q7RTU5 278 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 KLHL30-AS1Q8NEE0 82 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 TMEM167AQ8TBQ9 72 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 TMEM263Q8WUH6 116 aaKnown RBP3.31□□□□□ -1.88
SSR1-207ENST00000479485 RNF185Q96GF1 192 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 SHANK2-AS3Q9BTD1 123 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 SMIM2Q9BVW6 85 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 AGPAT4-IT1Q9H0P7 198 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 ESM1Q9NQ30 184 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 SERP1Q9Y6X1 66 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 SPAG17Q6Q759 2223 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 KIAA1549Q9HCM3 1950 aa3.31□□□□□ -1.88
SSR1-207ENST00000479485 IGLV2-18A0A075B6J9 118 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 M0R381 172 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 LST1O00453 97 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 CXCL13O43927 109 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 BCE1O60756 84 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 IGKV3-15P01624 115 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 SAA1P0DJI8 122 aaPredicted RBP3.3□□□□□ -1.88
SSR1-207ENST00000479485 PFN2P35080 140 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 SAA4P35542 130 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 EFNA4P52798 201 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 GFERP55789 205 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 KRTAP10-3P60369 221 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 KLRB1Q12918 225 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 FAM201AQ5SY85 155 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 FAM222AQ5U5X8 452 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 ATP5EP2Q5VTU8 51 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 HRCT1Q6UXD1 115 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 SDIM1Q6ZPB5 146 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 C17orf82Q86X59 251 aaPredicted RBP3.3□□□□□ -1.88
SSR1-207ENST00000479485 FAM216BQ8N7L0 139 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 VSIG2Q96IQ7 327 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 C9orf85Q96MD7 179 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 PLA2G2FQ9BZM2 168 aa3.3□□□□□ -1.88
SSR1-207ENST00000479485 EXPH5Q8NEV8 1989 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 hADV29S1A0JD25 119 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 SMKR1H3BMG3 65 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 J3QQQ9 107 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 LEPROTO15243 131 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 TIMM8AO60220 97 aaPredicted RBP3.29□□□□□ -1.88
SSR1-207ENST00000479485 SYNJ2BPP57105 145 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 FXYD7P58549 80 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 LYZP61626 148 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 ERCC8Q13216 396 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 C1orf195Q5TG92 126 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 Q5XG85 94 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 GUSBP11Q6P575 273 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 C16orf47Q6ZP98 133 aaPredicted RBP3.29□□□□□ -1.88
SSR1-207ENST00000479485 TIMM17AQ99595 171 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 LINC00574Q9H8X3 128 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 PCDH15Q96QU1 1955 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 TANC2Q9HCD6 1990 aa3.29□□□□□ -1.88
SSR1-207ENST00000479485 FAM236DA0A1B0GTK5 79 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 KNCNA6PVL3 124 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 H3BRN7 92 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 IGHG2P01859 326 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 FAM236CP0DP71 79 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 CRIP1P50238 77 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 C4orf26Q17RF5 130 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 Q6JHZ5 121 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 ZNF833PQ6ZTB9 187 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 WDR86Q86TI4 376 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 EXOC3-AS1Q8N2X6 119 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 C3orf56Q8N813 242 aa3.28□□□□□ -1.88
SSR1-207ENST00000479485 IGHV1OR21-1A0A087WYE8 117 aa3.27□□□□□ -1.89
SSR1-207ENST00000479485 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
SSR1-207ENST00000479485 NDUFC1O43677 76 aa3.27□□□□□ -1.89
SSR1-207ENST00000479485 ENSAO43768 121 aaKnown RBP3.27□□□□□ -1.89
SSR1-207ENST00000479485 DNAL4O96015 105 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms