RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CARHSP1Q9Y2V2 147 aaKnown RBP10.66□□□□□ -0.7
C9orf3-217ENST00000479161 DNAH2Q9P225 4427 aa10.66□□□□□ -0.7
C9orf3-217ENST00000479161 LOC105371267A0A1B0GV96 52 aa10.65□□□□□ -0.7
C9orf3-217ENST00000479161 TMEM218A2RU14 115 aa10.65□□□□□ -0.7
C9orf3-217ENST00000479161 F2Z2F3 143 aa10.65□□□□□ -0.7
C9orf3-217ENST00000479161 CRYGDP07320 174 aa10.65□□□□□ -0.7
C9orf3-217ENST00000479161 IGLC6P0CF74 106 aa10.65□□□□□ -0.7
C9orf3-217ENST00000479161 WDR73Q6P4I2 378 aa10.65□□□□□ -0.7
C9orf3-217ENST00000479161 FRAS1Q86XX4 4008 aa10.65□□□□□ -0.7
C9orf3-217ENST00000479161 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 APOC3P02656 99 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 FAM74A3Q4VXF1 159 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 TTC32Q5I0X7 151 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 FAM231DQ6ZW35 169 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 SVBPQ8N300 66 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 NUDT10Q8NFP7 164 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 NUDT11Q96G61 164 aa10.64□□□□□ -0.71
C9orf3-217ENST00000479161 M0R381 172 aa10.63□□□□□ -0.71
C9orf3-217ENST00000479161 SRP19P09132 144 aaKnown RBP10.63□□□□□ -0.71
C9orf3-217ENST00000479161 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
C9orf3-217ENST00000479161 SEC11CQ9BY50 192 aa10.63□□□□□ -0.71
C9orf3-217ENST00000479161 SAMD10Q9BYL1 202 aa10.63□□□□□ -0.71
C9orf3-217ENST00000479161 DNAH17Q9UFH2 4485 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 TRBV10-1A0A0K0K1A3 114 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 K7EN84 100 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 LINC00694P0DN24 101 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 CACNG7P62955 275 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 SOHLH1Q5JUK2 328 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 SPANXN1Q5VSR9 72 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 FER1L6-AS1Q8NA97 138 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 CNFNQ9BYD5 112 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 JPT2Q9H910 190 aa10.62□□□□□ -0.71
C9orf3-217ENST00000479161 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
C9orf3-217ENST00000479161 SIVA1O15304 175 aa10.61□□□□□ -0.71
C9orf3-217ENST00000479161 RAB4BP61018 213 aa10.61□□□□□ -0.71
C9orf3-217ENST00000479161 PEA15Q15121 130 aa10.61□□□□□ -0.71
C9orf3-217ENST00000479161 CT83Q5H943 113 aa10.61□□□□□ -0.71
C9orf3-217ENST00000479161 Q6ZSN1 163 aa10.61□□□□□ -0.71
C9orf3-217ENST00000479161 SMIM7Q9BQ49 75 aa10.61□□□□□ -0.71
C9orf3-217ENST00000479161 IGHV3-73A0A0B4J1V6 119 aa10.6□□□□□ -0.71
C9orf3-217ENST00000479161 SNAPINO95295 136 aa10.6□□□□□ -0.71
C9orf3-217ENST00000479161 C1orf134Q5TEV5 83 aa10.6□□□□□ -0.71
C9orf3-217ENST00000479161 RPP21Q9H633 154 aaKnown RBP10.6□□□□□ -0.71
C9orf3-217ENST00000479161 FAT2Q9NYQ8 4349 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 M0R2N4 97 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 CTRLP40313 264 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 FOXA3P55318 350 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-217ENST00000479161 LINC01551Q86U37 167 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-217ENST00000479161 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 AP1S3Q96PC3 154 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 KIF25-AS1Q9Y6Z4 181 aa10.59□□□□□ -0.71
C9orf3-217ENST00000479161 FAM231BA6NCW3 169 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 A8MWL6 223 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 F8W036 122 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 RTL8CO15255 209 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 DNAH10OSP0CZ25 163 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 CLRN3Q8NCR9 226 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 OR10G8Q8NGN5 311 aa10.58□□□□□ -0.72
C9orf3-217ENST00000479161 RNASE7Q9H1E1 156 aaKnown RBP10.58□□□□□ -0.72
C9orf3-217ENST00000479161 TRAV9-2A0A087WT02 112 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 A0A087WWC5 75 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 A0A087WWL8 130 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 GZMBP10144 247 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 ADCYAP1P18509 176 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 LINC00315P59091 139 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 TMEM241Q24JQ0 296 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 LELP1Q5T871 98 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 ATRAIDQ6UW56 229 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 C6orf223Q8N319 242 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 C14orf178Q8N769 122 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-217ENST00000479161 OSTCQ9NRP0 149 aa10.57□□□□□ -0.72
C9orf3-217ENST00000479161 GATCO43716 136 aaKnown RBP10.56□□□□□ -0.72
C9orf3-217ENST00000479161 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
C9orf3-217ENST00000479161 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
C9orf3-217ENST00000479161 LYZL1Q6UWQ5 148 aa10.56□□□□□ -0.72
C9orf3-217ENST00000479161 GFRA4Q9GZZ7 299 aa10.56□□□□□ -0.72
C9orf3-217ENST00000479161 TRBV7-3A0A075B6L6 115 aa10.55□□□□□ -0.72
C9orf3-217ENST00000479161 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
C9orf3-217ENST00000479161 CEBPGP53567 150 aa10.55□□□□□ -0.72
C9orf3-217ENST00000479161 ERVFC1-1P60608 527 aa10.55□□□□□ -0.72
C9orf3-217ENST00000479161 RPL36AP83881 106 aaKnown RBP10.55□□□□□ -0.72
C9orf3-217ENST00000479161 RPL36ALQ969Q0 106 aaKnown RBP10.55□□□□□ -0.72
C9orf3-217ENST00000479161 C9JQL5 133 aa10.54□□□□□ -0.72
C9orf3-217ENST00000479161 NTF3P20783 257 aa10.54□□□□□ -0.72
C9orf3-217ENST00000479161 LINC01556Q5JQF7 62 aa10.54□□□□□ -0.72
C9orf3-217ENST00000479161 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
C9orf3-217ENST00000479161 KRTAP1-5Q9BYS1 174 aa10.54□□□□□ -0.72
C9orf3-217ENST00000479161 NAT8Q9UHE5 227 aa10.54□□□□□ -0.72
C9orf3-217ENST00000479161 HECTD4Q9Y4D8 3996 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 H7C1H1 209 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 EVI2AP22794 236 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 UBE2D3P61077 147 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms