RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CACNG7P62955 275 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 FAM74A3Q4VXF1 159 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 UFSP1Q6NVU6 142 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 LYPD5Q6UWN5 251 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 RNASE7Q9H1E1 156 aaKnown RBP14.14□□□□□ -0.15
VARS-224ENST00000479051 Q9H8V8 135 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 DNAH6Q9C0G6 4158 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 KMT2AQ03164 3969 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 IGLC6P0CF74 106 aa14.13□□□□□ -0.15
VARS-224ENST00000479051 MUC21A0A0G2JKD1 596 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 MUC21A0A140T8X8 626 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 GATCO43716 136 aaKnown RBP14.12□□□□□ -0.15
VARS-224ENST00000479051 CRYGDP07320 174 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 SMIM17P0DL12 118 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 ERVFC1-1P60608 527 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 SSTP61278 116 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 FAM231DQ6ZW35 169 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 AP1S3Q96PC3 154 aa14.12□□□□□ -0.15
VARS-224ENST00000479051 NBDYA0A0U1RRE5 68 aa14.11□□□□□ -0.15
VARS-224ENST00000479051 TTC32Q5I0X7 151 aa14.11□□□□□ -0.15
VARS-224ENST00000479051 LINC01551Q86U37 167 aa14.11□□□□□ -0.15
VARS-224ENST00000479051 SOHLH1Q5JUK2 328 aa14.1□□□□□ -0.15
VARS-224ENST00000479051 Q6ZR54 194 aa14.1□□□□□ -0.15
VARS-224ENST00000479051 Q6ZSN1 163 aa14.1□□□□□ -0.15
VARS-224ENST00000479051 TIRAPP58753 221 aa14.09□□□□□ -0.15
VARS-224ENST00000479051 RAB4BP61018 213 aa14.09□□□□□ -0.15
VARS-224ENST00000479051 ZNF56Q15929 161 aa14.09□□□□□ -0.15
VARS-224ENST00000479051 TMEM241Q24JQ0 296 aa14.09□□□□□ -0.15
VARS-224ENST00000479051 LYZL1Q6UWQ5 148 aa14.09□□□□□ -0.15
VARS-224ENST00000479051 TRBV10-1A0A0K0K1A3 114 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 GAGE12JA6NER3 117 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 A8MWL6 223 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 SIVA1O15304 175 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 CTRLP40313 264 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 GAGE1Q13065 139 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 GAGE4Q13068 117 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 GAGE5Q13069 117 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 GAGE13Q4V321 117 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 WDR73Q6P4I2 378 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 C14orf178Q8N769 122 aaPredicted RBP14.08□□□□□ -0.16
VARS-224ENST00000479051 ATP6V0E2Q8NHE4 81 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 NAT8Q9UHE5 227 aa14.08□□□□□ -0.16
VARS-224ENST00000479051 C9JQL5 133 aa14.07□□□□□ -0.16
VARS-224ENST00000479051 F5H697 171 aa14.07□□□□□ -0.16
VARS-224ENST00000479051 TRGC1P0CF51 173 aa14.07□□□□□ -0.16
VARS-224ENST00000479051 SRSF3P84103 164 aaKnown RBP14.07□□□□□ -0.16
VARS-224ENST00000479051 CT83Q5H943 113 aa14.07□□□□□ -0.16
VARS-224ENST00000479051 C15orf54Q8N8G6 183 aa14.07□□□□□ -0.16
VARS-224ENST00000479051 C1orf134Q5TEV5 83 aa14.06□□□□□ -0.16
VARS-224ENST00000479051 OSTCQ9NRP0 149 aa14.06□□□□□ -0.16
VARS-224ENST00000479051 RPL36AP83881 106 aaKnown RBP14.05□□□□□ -0.16
VARS-224ENST00000479051 CLLU1Q5K131 121 aa14.05□□□□□ -0.16
VARS-224ENST00000479051 LINC00336Q6ZUF6 198 aa14.05□□□□□ -0.16
VARS-224ENST00000479051 RPL36ALQ969Q0 106 aaKnown RBP14.05□□□□□ -0.16
VARS-224ENST00000479051 GTSF1LQ9H1H1 148 aa14.05□□□□□ -0.16
VARS-224ENST00000479051 TRAV8-6A0A0B4J262 113 aa14.04□□□□□ -0.16
VARS-224ENST00000479051 NTF3P20783 257 aa14.04□□□□□ -0.16
VARS-224ENST00000479051 ADIRFQ15847 76 aa14.04□□□□□ -0.16
VARS-224ENST00000479051 BORCS7Q96B45 105 aa14.04□□□□□ -0.16
VARS-224ENST00000479051 TRAV9-2A0A087WT02 112 aa14.03□□□□□ -0.16
VARS-224ENST00000479051 RPL23P62829 140 aaKnown RBP14.03□□□□□ -0.16
VARS-224ENST00000479051 TWIST1Q15672 202 aa14.03□□□□□ -0.16
VARS-224ENST00000479051 OR10J3Q5JRS4 329 aa14.03□□□□□ -0.16
VARS-224ENST00000479051 ISOC2Q96AB3 205 aa14.03□□□□□ -0.16
VARS-224ENST00000479051 CNFNQ9BYD5 112 aa14.03□□□□□ -0.16
VARS-224ENST00000479051 MSRB1Q9NZV6 116 aa14.03□□□□□ -0.16
VARS-224ENST00000479051 MGPP08493 103 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 LINC00694P0DN24 101 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 LELP1Q5T871 98 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 SMIM15Q7Z3B0 74 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 C6orf223Q8N319 242 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 GTSF1Q8WW33 167 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 GFRA4Q9GZZ7 299 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 KIF25-AS1Q9Y6Z4 181 aa14.02□□□□□ -0.17
VARS-224ENST00000479051 TRBV7-3A0A075B6L6 115 aa14.01□□□□□ -0.17
VARS-224ENST00000479051 H7C1H1 209 aa14.01□□□□□ -0.17
VARS-224ENST00000479051 BTF3P20290 206 aaKnown RBP14.01□□□□□ -0.17
VARS-224ENST00000479051 EVI2AP22794 236 aa14.01□□□□□ -0.17
VARS-224ENST00000479051 WFDC10BQ8IUB3 73 aa14.01□□□□□ -0.17
VARS-224ENST00000479051 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.01□□□□□ -0.17
VARS-224ENST00000479051 TSKUQ8WUA8 353 aa14.01□□□□□ -0.17
VARS-224ENST00000479051 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
VARS-224ENST00000479051 A0A087WWC5 75 aa14□□□□□ -0.17
VARS-224ENST00000479051 FAM231BA6NCW3 169 aa14□□□□□ -0.17
VARS-224ENST00000479051 K7EP13 123 aa14□□□□□ -0.17
VARS-224ENST00000479051 IFITM2Q01629 132 aa14□□□□□ -0.17
VARS-224ENST00000479051 OR10G8Q8NGN5 311 aa14□□□□□ -0.17
VARS-224ENST00000479051 PGLYRP4Q96LB8 373 aa14□□□□□ -0.17
VARS-224ENST00000479051 FOXA3P55318 350 aaPredicted RBP13.99□□□□□ -0.17
VARS-224ENST00000479051 Q9UF83 564 aa13.99□□□□□ -0.17
VARS-224ENST00000479051 IGHV3-38A0A0C4DH36 116 aa13.98□□□□□ -0.17
VARS-224ENST00000479051 RTL8CO15255 209 aa13.98□□□□□ -0.17
VARS-224ENST00000479051 DNAH10OSP0CZ25 163 aa13.98□□□□□ -0.17
VARS-224ENST00000479051 LINC00315P59091 139 aa13.98□□□□□ -0.17
VARS-224ENST00000479051 HIGD1CA8MV81 97 aa13.97□□□□□ -0.17
VARS-224ENST00000479051 UBE2D3P61077 147 aa13.97□□□□□ -0.17
VARS-224ENST00000479051 UBE2D2P62837 147 aa13.97□□□□□ -0.17
VARS-224ENST00000479051 C10orf126Q8N4M7 172 aa13.97□□□□□ -0.17
VARS-224ENST00000479051 NEXN-AS1Q8NBZ9 246 aa13.97□□□□□ -0.17
VARS-224ENST00000479051 KRTAP1-5Q9BYS1 174 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms