RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
VCL-205ENST00000478896 ARMS2P0C7Q2 107 aa8.71□□□□□ -1.02
VCL-205ENST00000478896 TPT1P13693 172 aaKnown RBP8.71□□□□□ -1.02
VCL-205ENST00000478896 BORCS7-ASMTA0A0B4J1R7 106 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 M0R381 172 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 UBE2G1P62253 170 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 ELOBQ15370 118 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 INO80EQ8NBZ0 244 aaPredicted RBP8.7□□□□□ -1.02
VCL-205ENST00000478896 HIST1H2BAQ96A08 127 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 ZC2HC1AQ96GY0 325 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 DNAJC30Q96LL9 226 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 MED28Q9H204 178 aa8.7□□□□□ -1.02
VCL-205ENST00000478896 TMSB15BA0A087X1C1 80 aa8.69□□□□□ -1.02
VCL-205ENST00000478896 KRBOX1C9JBD0 128 aa8.69□□□□□ -1.02
VCL-205ENST00000478896 SH2D1AO60880 128 aa8.69□□□□□ -1.02
VCL-205ENST00000478896 RPL36AP83881 106 aaKnown RBP8.69□□□□□ -1.02
VCL-205ENST00000478896 ZNF726P1Q15940 193 aa8.69□□□□□ -1.02
VCL-205ENST00000478896 FAM162BQ5T6X4 162 aa8.69□□□□□ -1.02
VCL-205ENST00000478896 RPL7L1Q6DKI1 246 aaKnown RBP8.69□□□□□ -1.02
VCL-205ENST00000478896 RPL36ALQ969Q0 106 aaKnown RBP8.69□□□□□ -1.02
VCL-205ENST00000478896 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
VCL-205ENST00000478896 NKX6-2Q9C056 277 aaPredicted RBP8.69□□□□□ -1.02
VCL-205ENST00000478896 DNAH8Q96JB1 4490 aa8.69□□□□□ -1.02
VCL-205ENST00000478896 FXYD6-FXYD2A0A087WZ82 144 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 A6NHS1 94 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 FAM74A7A6NL05 159 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 CRPP02741 224 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 Q0VG73 95 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 DNLZQ5SXM8 178 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 AKR1C8PQ5T2L2 129 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 ZFP82Q8N141 532 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 SFRP2Q96HF1 295 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 FMC1Q96HJ9 113 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 C1orf43Q9BWL3 253 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 ZFP30Q9Y2G7 519 aa8.68□□□□□ -1.02
VCL-205ENST00000478896 TRBV10-1A0A0K0K1A3 114 aa8.67□□□□□ -1.02
VCL-205ENST00000478896 TMEM262E9PQX1 116 aa8.67□□□□□ -1.02
VCL-205ENST00000478896 CRIP1P50238 77 aa8.67□□□□□ -1.02
VCL-205ENST00000478896 C14orf177Q52M58 125 aa8.67□□□□□ -1.02
VCL-205ENST00000478896 TRBV7-3A0A075B6L6 115 aa8.66□□□□□ -1.02
VCL-205ENST00000478896 GIPP09681 153 aaPredicted RBP8.66□□□□□ -1.02
VCL-205ENST00000478896 UBE2D3P61077 147 aa8.66□□□□□ -1.02
VCL-205ENST00000478896 UBE2D2P62837 147 aa8.66□□□□□ -1.02
VCL-205ENST00000478896 ZNF56Q15929 161 aa8.66□□□□□ -1.02
VCL-205ENST00000478896 LINC01559Q495D7 138 aa8.66□□□□□ -1.02
VCL-205ENST00000478896 Q5BKY6 102 aa8.66□□□□□ -1.02
VCL-205ENST00000478896 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
VCL-205ENST00000478896 MAP1LC3B2A6NCE7 125 aa8.65□□□□□ -1.02
VCL-205ENST00000478896 AKR1C3P42330 323 aa8.65□□□□□ -1.02
VCL-205ENST00000478896 ZNF674Q2M3X9 581 aa8.65□□□□□ -1.02
VCL-205ENST00000478896 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
VCL-205ENST00000478896 ATRAIDQ6UW56 229 aa8.65□□□□□ -1.02
VCL-205ENST00000478896 C15orf54Q8N8G6 183 aa8.65□□□□□ -1.02
VCL-205ENST00000478896 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.65□□□□□ -1.02
VCL-205ENST00000478896 MAP1LC3BQ9GZQ8 125 aa8.65□□□□□ -1.02
VCL-205ENST00000478896 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.03
VCL-205ENST00000478896 PTTG1O95997 202 aa8.64□□□□□ -1.03
VCL-205ENST00000478896 HLA-DQA1P01909 254 aa8.64□□□□□ -1.03
VCL-205ENST00000478896 ANGP03950 147 aaKnown RBP8.64□□□□□ -1.03
VCL-205ENST00000478896 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
VCL-205ENST00000478896 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
VCL-205ENST00000478896 STOML3Q8TAV4 291 aa8.64□□□□□ -1.03
VCL-205ENST00000478896 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
VCL-205ENST00000478896 LTAP01374 205 aa8.63□□□□□ -1.03
VCL-205ENST00000478896 IGLV2-8P01709 118 aa8.63□□□□□ -1.03
VCL-205ENST00000478896 MPV17L2Q567V2 206 aa8.63□□□□□ -1.03
VCL-205ENST00000478896 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
VCL-205ENST00000478896 RAB4BP61018 213 aa8.62□□□□□ -1.03
VCL-205ENST00000478896 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
VCL-205ENST00000478896 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
VCL-205ENST00000478896 OR10G8Q8NGN5 311 aa8.62□□□□□ -1.03
VCL-205ENST00000478896 CHCHD5Q9BSY4 110 aa8.62□□□□□ -1.03
VCL-205ENST00000478896 TRBV6-1A0A0K0K1D8 114 aa8.61□□□□□ -1.03
VCL-205ENST00000478896 USP17L23D6RBM5 183 aa8.61□□□□□ -1.03
VCL-205ENST00000478896 OXTP01178 125 aa8.61□□□□□ -1.03
VCL-205ENST00000478896 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
VCL-205ENST00000478896 RPL37AP61513 92 aaKnown RBP8.61□□□□□ -1.03
VCL-205ENST00000478896 PKIAP61925 76 aa8.61□□□□□ -1.03
VCL-205ENST00000478896 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
VCL-205ENST00000478896 OR10AG1Q8NH19 301 aa8.61□□□□□ -1.03
VCL-205ENST00000478896 ZNF471Q9BX82 626 aaPredicted RBP8.61□□□□□ -1.03
VCL-205ENST00000478896 F5H697 171 aa8.6□□□□□ -1.03
VCL-205ENST00000478896 FHITP49789 147 aa8.6□□□□□ -1.03
VCL-205ENST00000478896 SPANXN1Q5VSR9 72 aa8.6□□□□□ -1.03
VCL-205ENST00000478896 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
VCL-205ENST00000478896 ARPC5O15511 151 aa8.59□□□□□ -1.03
VCL-205ENST00000478896 PAGE4O60829 102 aa8.59□□□□□ -1.03
VCL-205ENST00000478896 MIAQ16674 131 aa8.59□□□□□ -1.03
VCL-205ENST00000478896 MUC21A0A0G2JKD1 596 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 MUC21A0A140T8X8 626 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 PFDN1O60925 122 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 SMIM17P0DL12 118 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 SSTP61278 116 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 PRR27Q6MZM9 219 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 PLA2G2DQ9UNK4 145 aa8.58□□□□□ -1.04
VCL-205ENST00000478896 A0A1B0GV50 99 aa8.57□□□□□ -1.04
VCL-205ENST00000478896 SCO2A0A1W2PP80 73 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms