RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 J3QQQ9 107 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 ATP6V0E1O15342 81 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 S100A7L2Q5SY68 101 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 C11orf71Q6IPW1 123 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 Q6ZQT7 251 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 PIP4P2Q8N4L2 257 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 TTC9CQ8N5M4 171 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 LINC00482Q8N8I6 264 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 OR11H6Q8NGC7 330 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 VGLL1Q99990 258 aa4.68□□□□□ -1.66
SH3D19-207ENST00000478503 IGHV7-81A0A0B4J1V7 117 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 F8W735 103 aaPredicted RBP4.67□□□□□ -1.66
SH3D19-207ENST00000478503 APOHP02749 345 aaPredicted RBP4.67□□□□□ -1.66
SH3D19-207ENST00000478503 HILS1P60008 231 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 Q8N976 141 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 C9orf85Q96MD7 179 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 OTORQ9NRC9 128 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 JMJD1CQ15652 2540 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 TRAV9-1A0A075B6T8 112 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 PRAC2D3DTV9 90 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 HOXA3O43365 443 aaPredicted RBP4.67□□□□□ -1.66
SH3D19-207ENST00000478503 IGHV3-11P01762 117 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 REG3AQ06141 175 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 URB1-AS1Q96HZ7 61 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 ZNF414Q96IQ9 312 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 TRAV26-2A0A0B4J265 109 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 NCR2O95944 276 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 CTSGP08311 255 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 FBXL19-AS1Q494R0 122 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 OR4X2Q8NGF9 303 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 DEFB104AQ8WTQ1 72 aa4.67□□□□□ -1.66
SH3D19-207ENST00000478503 IGLV11-55A0A075B6I3 123 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 H3BRN7 92 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 EGR2P11161 476 aaPredicted RBP4.66□□□□□ -1.66
SH3D19-207ENST00000478503 ETDBQ3ZM63 59 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 OR10AG1Q8NH19 301 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 MSRB1Q9NZV6 116 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 TRAV40A0A0B4J280 105 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 C19orf71A6NCJ1 209 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 ODF3BA8MYP8 253 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 IGLC2P0DOY2 106 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 TEX43Q6ZNM6 134 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 ZNF493Q6ZR52 646 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 Q6ZUT4 128 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 Q8N9W7 124 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 OOSP1A8MZH6 123 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 ZNF80P51504 273 aaPredicted RBP4.66□□□□□ -1.66
SH3D19-207ENST00000478503 RPS28P62857 69 aaKnown RBP4.66□□□□□ -1.66
SH3D19-207ENST00000478503 LOXL1Q08397 574 aaPredicted RBP4.66□□□□□ -1.66
SH3D19-207ENST00000478503 SRSF9Q13242 221 aaKnown RBP eCLIP4.66□□□□□ -1.66
SH3D19-207ENST00000478503 RBMY1FQ15415 496 aaKnown RBP4.66□□□□□ -1.66
SH3D19-207ENST00000478503 LYZL1Q6UWQ5 148 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 AMN1Q8IY45 258 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 RAB37Q96AX2 223 aa4.66□□□□□ -1.66
SH3D19-207ENST00000478503 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.66
SH3D19-207ENST00000478503 PRB1P04280 392 aa4.65□□□□□ -1.66
SH3D19-207ENST00000478503 ITLN2Q8WWU7 325 aaPredicted RBP4.65□□□□□ -1.66
SH3D19-207ENST00000478503 TRAV13-1A0A0B4J241 112 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 A0A1B0GXF2 115 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 OVOL1O14753 267 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 NDUFA3O95167 84 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 GAS8-AS1O95177 125 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 CSN1S1P47710 185 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 LAGE3Q14657 143 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 SMAD5-AS1Q9Y6J3 95 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 IGHV1-24A0A0C4DH33 117 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 A0A1B0GUT8 65 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 M0R1W7 72 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 TRBV12-3P01733 135 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 IGHV4-39P01824 125 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 TRACP01848 142 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 LMO4P61968 165 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 NPBQ8NG41 125 aa4.65□□□□□ -1.67
SH3D19-207ENST00000478503 IGHV4-61A0A0C4DH41 118 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 SH2D1AO60880 128 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 IGHV4-38-2P0DP08 117 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 IGLL1P15814 213 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 PVRIGQ6DKI7 326 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 Q6ZS46 218 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 OR8A1Q8NGG7 326 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 PRSS3P2Q8NHM4 247 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 AJUBAQ96IF1 538 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 RABAC1Q9UI14 185 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 CHD6Q8TD26 2715 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 D6R8Y8 96 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 LEPROTL1O95214 131 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 IFI27P40305 119 aaPredicted RBP4.64□□□□□ -1.67
SH3D19-207ENST00000478503 EFNA4P52798 201 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 TWIST1Q15672 202 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 MPV17L2Q567V2 206 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 Q8N1Y9 231 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 TMEM262E9PQX1 116 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 K7EP34 96 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 MRPS12O15235 138 aaKnown RBP4.64□□□□□ -1.67
SH3D19-207ENST00000478503 ATP5G1P05496 136 aa4.64□□□□□ -1.67
SH3D19-207ENST00000478503 MRPS16Q9Y3D3 137 aaKnown RBP4.64□□□□□ -1.67
SH3D19-207ENST00000478503 WI2-2373I1.2A0A1W2PRP0 233 aa4.63□□□□□ -1.67
SH3D19-207ENST00000478503 BLCAPP62952 87 aa4.63□□□□□ -1.67
SH3D19-207ENST00000478503 FAM222AQ5U5X8 452 aa4.63□□□□□ -1.67
SH3D19-207ENST00000478503 OR10J6PQ8NGY7 276 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms