RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
NPHP4-208ENST00000478423 COX11Q9Y6N1 276 aa10.92□□□□□ -0.66
NPHP4-208ENST00000478423 CDSNQ15517 529 aa10.92□□□□□ -0.66
NPHP4-208ENST00000478423 DLX4Q92988 240 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-208ENST00000478423 TMEM61Q8N0U2 210 aa10.91□□□□□ -0.66
NPHP4-208ENST00000478423 NDUFA12Q9UI09 145 aa10.91□□□□□ -0.66
NPHP4-208ENST00000478423 GHRHP01286 108 aa10.91□□□□□ -0.66
NPHP4-208ENST00000478423 ADAMTSL5Q6ZMM2 481 aa10.91□□□□□ -0.66
NPHP4-208ENST00000478423 LINC00173Q6ZV60 143 aa10.91□□□□□ -0.66
NPHP4-208ENST00000478423 LEPROTO15243 131 aa10.9□□□□□ -0.66
NPHP4-208ENST00000478423 RANBP2P49792 3224 aaKnown RBP10.9□□□□□ -0.66
NPHP4-208ENST00000478423 TMEM89A2RUT3 159 aa10.9□□□□□ -0.66
NPHP4-208ENST00000478423 Q8N1Y9 231 aa10.9□□□□□ -0.66
NPHP4-208ENST00000478423 PFN2P35080 140 aa10.9□□□□□ -0.67
NPHP4-208ENST00000478423 LY6LH3BQJ8 138 aa10.89□□□□□ -0.67
NPHP4-208ENST00000478423 CRYGBP07316 175 aa10.89□□□□□ -0.67
NPHP4-208ENST00000478423 C19orf71A6NCJ1 209 aa10.89□□□□□ -0.67
NPHP4-208ENST00000478423 ZNF124Q15973 351 aa10.89□□□□□ -0.67
NPHP4-208ENST00000478423 C10orf126Q8N4M7 172 aa10.89□□□□□ -0.67
NPHP4-208ENST00000478423 J3QQQ9 107 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 EBI3Q14213 229 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 K7EMI3 77 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 RHOHQ15669 191 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 IGHG4P01861 327 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 SUMO4Q6EEV6 95 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 WFDC11Q8NEX6 87 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
NPHP4-208ENST00000478423 IGF1P05019 195 aa10.88□□□□□ -0.67
NPHP4-208ENST00000478423 LINC00322Q6ZN03 302 aaPredicted RBP10.88□□□□□ -0.67
NPHP4-208ENST00000478423 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-208ENST00000478423 IGKV2-29A2NJV5 120 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-208ENST00000478423 TDRG1Q3Y452 100 aa10.87□□□□□ -0.67
NPHP4-208ENST00000478423 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
NPHP4-208ENST00000478423 FLNBO75369 2602 aaKnown RBP10.87□□□□□ -0.67
NPHP4-208ENST00000478423 A0A0J9YY99 117 aa10.86□□□□□ -0.67
NPHP4-208ENST00000478423 PSCAO43653 123 aa10.86□□□□□ -0.67
NPHP4-208ENST00000478423 CTRLP40313 264 aa10.86□□□□□ -0.67
NPHP4-208ENST00000478423 C2orf82Q6UX34 121 aa10.86□□□□□ -0.67
NPHP4-208ENST00000478423 PCP2Q8IVA1 136 aa10.86□□□□□ -0.67
NPHP4-208ENST00000478423 ANGP03950 147 aaKnown RBP10.86□□□□□ -0.67
NPHP4-208ENST00000478423 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
NPHP4-208ENST00000478423 TRAV8-3A0A0A6YYJ7 113 aa10.86□□□□□ -0.67
NPHP4-208ENST00000478423 TRBV6-1A0A0K0K1D8 114 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 ZNF80P51504 273 aaPredicted RBP10.85□□□□□ -0.67
NPHP4-208ENST00000478423 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 C9JAW5 83 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 CHD7Q9P2D1 2997 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 A0A0J9YX75 114 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 A0A1B0GV72 72 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 DNAJC9-AS1A6NH13 148 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 ZNF843Q8N446 348 aa10.85□□□□□ -0.67
NPHP4-208ENST00000478423 CLPSL2Q6UWE3 100 aa10.84□□□□□ -0.67
NPHP4-208ENST00000478423 ZNF561-AS1K7EIQ3 104 aa10.84□□□□□ -0.67
NPHP4-208ENST00000478423 NXPH4O95158 308 aa10.84□□□□□ -0.67
NPHP4-208ENST00000478423 IGHV4-31P0DP07 118 aa10.84□□□□□ -0.67
NPHP4-208ENST00000478423 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
NPHP4-208ENST00000478423 MLST8Q9BVC4 326 aa10.84□□□□□ -0.67
NPHP4-208ENST00000478423 HERVK_113P63121 156 aa10.84□□□□□ -0.67
NPHP4-208ENST00000478423 CLPSL1A2RUU4 121 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 KIR2DL5BA0A0G2JN68 375 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 KIR2DL5BA0A0G2JPC4 375 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 ANKRD39Q53RE8 183 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 KIR2DL5AQ8N109 375 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 HIST2H2BCQ6DN03 193 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 LRRC75A-AS1Q8N1F1 130 aa10.83□□□□□ -0.68
NPHP4-208ENST00000478423 MTURNQ8N3F0 131 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 C4orf3Q8WVX3 66 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 MDFICQ9P1T7 246 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 TRAV8-4A0A0B4J246 113 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 TRAV25A0A0B4J276 109 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 LINC01545Q5VT33 79 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 C9orf118A6NHY6 69 aa10.82□□□□□ -0.68
NPHP4-208ENST00000478423 MYCNOSP40205 109 aa10.81□□□□□ -0.68
NPHP4-208ENST00000478423 EML5Q05BV3 1969 aa10.81□□□□□ -0.68
NPHP4-208ENST00000478423 A0A0J9YXV3 536 aa10.81□□□□□ -0.68
NPHP4-208ENST00000478423 SIGMAR1Q99720 223 aa10.81□□□□□ -0.68
NPHP4-208ENST00000478423 RPL39P62891 51 aaKnown RBP10.81□□□□□ -0.68
NPHP4-208ENST00000478423 Q6YL49 198 aa10.81□□□□□ -0.68
NPHP4-208ENST00000478423 LAMTOR3Q9UHA4 124 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 XCL1P47992 114 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 C16orf74Q96GX8 76 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 PRO1854Q9UHT4 67 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 A0A1B0GXF2 115 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 K7ERJ3 54 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 SPANXA1Q9NS26 97 aa10.8□□□□□ -0.68
NPHP4-208ENST00000478423 ETDBQ3ZM63 59 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 C10orf99Q6UWK7 81 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 CEND1Q8N111 149 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 ZFAND3Q9H8U3 227 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 ESM1Q9NQ30 184 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 SIVA1O15304 175 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 MED14OSP0DP75 135 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 FGF6P10767 208 aa10.79□□□□□ -0.68
NPHP4-208ENST00000478423 GYPEP15421 78 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 TAL2Q16559 108 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms