RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 C14orf177Q52M58 125 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 SAPCD1Q5SSQ6 148 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 EIF5AL1Q6IS14 154 aaKnown RBP6.29□□□□□ -1.4
CCM2-210ENST00000478169 UFSP1Q6NVU6 142 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 ATRAIDQ6UW56 229 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 SLC51BQ86UW2 128 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 TMEM75Q8N9X5 138 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
CCM2-210ENST00000478169 RHODO00212 210 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 MPC2O95563 127 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 STAG3L2P0CL84 134 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 STAG3L3P0CL85 134 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 S100A4P26447 101 aaKnown RBP6.28□□□□□ -1.4
CCM2-210ENST00000478169 H2BFSP57053 126 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 RAB2AP61019 212 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 FLI1Q01543 452 aaPredicted RBP6.28□□□□□ -1.4
CCM2-210ENST00000478169 Q0VG73 95 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 INO80EQ8NBZ0 244 aaPredicted RBP6.28□□□□□ -1.4
CCM2-210ENST00000478169 OR10G7Q8NGN6 311 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 SAMD10Q9BYL1 202 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 Q9UF83 564 aa6.28□□□□□ -1.4
CCM2-210ENST00000478169 A0A087WX48 190 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 IGKV3D-20A0A0C4DH25 116 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 HMGB3O15347 200 aaKnown RBP6.27□□□□□ -1.41
CCM2-210ENST00000478169 ARL14EPLP0DKL9 152 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 ASIPP42127 132 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 CDC34P49427 236 aaPredicted RBP6.27□□□□□ -1.41
CCM2-210ENST00000478169 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
CCM2-210ENST00000478169 ZNF345Q14585 488 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 KCNIP4Q6PIL6 250 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 PRNTQ86SH4 94 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 C14orf178Q8N769 122 aaPredicted RBP6.27□□□□□ -1.41
CCM2-210ENST00000478169 UBE2WQ96B02 151 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 JPT2Q9H910 190 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 WFDC1Q9HC57 220 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 IL36BQ9NZH7 164 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 EPDR1Q9UM22 224 aa6.27□□□□□ -1.41
CCM2-210ENST00000478169 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
CCM2-210ENST00000478169 FABP5P3A8MUU1 101 aa6.26□□□□□ -1.41
CCM2-210ENST00000478169 TEX46H3BTG2 121 aa6.26□□□□□ -1.41
CCM2-210ENST00000478169 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
CCM2-210ENST00000478169 GCHFRP30047 84 aa6.26□□□□□ -1.41
CCM2-210ENST00000478169 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
CCM2-210ENST00000478169 Q5BKY6 102 aa6.26□□□□□ -1.41
CCM2-210ENST00000478169 DNLZQ5SXM8 178 aa6.26□□□□□ -1.41
CCM2-210ENST00000478169 COMMD7Q86VX2 200 aa6.26□□□□□ -1.41
CCM2-210ENST00000478169 FXYD6-FXYD2A0A087WZ82 144 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 SMLR1H3BR10 107 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 TMUB2Q71RG4 321 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 OR2G3Q8NGZ4 309 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 RAB24Q969Q5 203 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 C1orf43Q9BWL3 253 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 TMEM167BQ9NRX6 74 aa6.25□□□□□ -1.41
CCM2-210ENST00000478169 B4DEV8 164 aa6.24□□□□□ -1.41
CCM2-210ENST00000478169 ARPC5O15511 151 aa6.24□□□□□ -1.41
CCM2-210ENST00000478169 FAM74A4Q5TZK3 123 aa6.24□□□□□ -1.41
CCM2-210ENST00000478169 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
CCM2-210ENST00000478169 UQCC3Q6UW78 93 aa6.24□□□□□ -1.41
CCM2-210ENST00000478169 OR11H4Q8NGC9 324 aa6.24□□□□□ -1.41
CCM2-210ENST00000478169 DAZAP1Q96EP5 407 aaKnown RBP6.24□□□□□ -1.41
CCM2-210ENST00000478169 SFRP2Q96HF1 295 aa6.24□□□□□ -1.41
CCM2-210ENST00000478169 PSMG3Q9BT73 122 aaPredicted RBP6.24□□□□□ -1.41
CCM2-210ENST00000478169 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 A0A1W2PRE2 83 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 A6NJY4 79 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 H3BVH4 76 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 CXorf1O96002 111 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 MBP02144 154 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 ARMS2P0C7Q2 107 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 TPT1P13693 172 aaKnown RBP6.23□□□□□ -1.41
CCM2-210ENST00000478169 HNRNPA3P51991 378 aaKnown RBP6.23□□□□□ -1.41
CCM2-210ENST00000478169 UBE2D3P61077 147 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 UBE2D2P62837 147 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 RPL36AP83881 106 aaKnown RBP6.23□□□□□ -1.41
CCM2-210ENST00000478169 ENHOQ6UWT2 76 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 KCNRGQ8N5I3 272 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 RPL36ALQ969Q0 106 aaKnown RBP6.23□□□□□ -1.41
CCM2-210ENST00000478169 ARL2-SNX15V9GYD0 113 aa6.23□□□□□ -1.41
CCM2-210ENST00000478169 A0A087WWL8 130 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 USP17L23D6RBM5 183 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 TMEM262E9PQX1 116 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 BCL2L11O43521 198 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 CRPP02741 224 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 SERF2P84101 59 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 Q6ZRU5 148 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 C9orf163Q8N9P6 203 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 HSD17B11Q8NBQ5 300 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 OR10G8Q8NGN5 311 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 PHLDA3Q9Y5J5 127 aa6.22□□□□□ -1.41
CCM2-210ENST00000478169 TRBV6-8A0A0A6YYG3 113 aa6.21□□□□□ -1.42
CCM2-210ENST00000478169 TRAV34A0A0B4J273 112 aa6.21□□□□□ -1.42
CCM2-210ENST00000478169 RAB19A4D1S5 217 aa6.21□□□□□ -1.42
CCM2-210ENST00000478169 PRSS1P07477 247 aa6.21□□□□□ -1.42
CCM2-210ENST00000478169 ATP6V0CP27449 155 aa6.21□□□□□ -1.42
CCM2-210ENST00000478169 PKIAP61925 76 aa6.21□□□□□ -1.42
CCM2-210ENST00000478169 MIAQ16674 131 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms